Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Y_RNA.386-201ENST00000383913 105 ntBASIC0.75□□□□□ -2.29
SYNE4Q8N205 SNORD116-24-201ENST00000384549 92 ntBASIC0.75□□□□□ -2.29
SYNE4Q8N205 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE4Q8N205 RNU6-752P-201ENST00000516376 102 ntBASIC0.75□□□□□ -2.29
SYNE4Q8N205 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
SYNE4Q8N205 AC069503.3-201ENST00000618674 145 ntBASIC0.75□□□□□ -2.29
SYNE4Q8N205 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE4Q8N205 SNORD113.1-201ENST00000363280 73 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 RNU6-539P-201ENST00000516665 103 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 RNU6-881P-201ENST00000516813 102 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.74□□□□□ -2.29
SYNE4Q8N205 MIR582-201ENST00000365731 98 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 SNORD30.1-201ENST00000391309 70 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 snoU13.13-201ENST00000458842 104 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 RNU6-871P-201ENST00000516122 100 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 RNU6-1232P-201ENST00000516299 86 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
SYNE4Q8N205 RNU6-663P-201ENST00000391105 106 ntBASIC0.72□□□□□ -2.29
SYNE4Q8N205 AC006210.1-201ENST00000424882 111 ntBASIC0.72□□□□□ -2.29
SYNE4Q8N205 HMGN2P22-201ENST00000427588 175 ntBASIC0.72□□□□□ -2.29
SYNE4Q8N205 RNU6-260P-201ENST00000384092 107 ntBASIC0.71□□□□□ -2.3
SYNE4Q8N205 RNU6-649P-201ENST00000384463 107 ntBASIC0.71□□□□□ -2.3
SYNE4Q8N205 MIR652-201ENST00000385278 98 ntBASIC0.71□□□□□ -2.3
SYNE4Q8N205 SNORD110-201ENST00000408189 75 ntBASIC0.71□□□□□ -2.3
SYNE4Q8N205 SNORD118-201ENST00000363593 134 ntBASIC0.7□□□□□ -2.3
SYNE4Q8N205 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
SYNE4Q8N205 AC092634.7-201ENST00000621022 103 ntBASIC0.7□□□□□ -2.3
SYNE4Q8N205 U6.111-201ENST00000636093 83 ntBASIC0.7□□□□□ -2.3
SYNE4Q8N205 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SYNE4Q8N205 MIR6755-201ENST00000619993 66 ntBASIC0.69□□□□□ -2.3
SYNE4Q8N205 AC073869.9-201ENST00000641610 120 ntBASIC0.69□□□□□ -2.3
SYNE4Q8N205 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE4Q8N205 RNU6-788P-201ENST00000390967 104 ntBASIC0.68□□□□□ -2.3
SYNE4Q8N205 RNA5SP285-201ENST00000516619 119 ntBASIC0.68□□□□□ -2.3
SYNE4Q8N205 MIR8053-201ENST00000613344 75 ntBASIC0.68□□□□□ -2.3
SYNE4Q8N205 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SYNE4Q8N205 SNORA2.1-201ENST00000363089 137 ntBASIC0.67□□□□□ -2.3
SYNE4Q8N205 RNU6-895P-201ENST00000384125 103 ntBASIC0.67□□□□□ -2.3
SYNE4Q8N205 MIR1265-201ENST00000408444 86 ntBASIC0.67□□□□□ -2.3
SYNE4Q8N205 AC005520.4-201ENST00000604337 90 ntBASIC0.67□□□□□ -2.3
SYNE4Q8N205 RNU6-645P-201ENST00000364649 106 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 Y_RNA.407-201ENST00000383986 113 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 Y_RNA.423-201ENST00000384057 113 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 RNU6-800P-201ENST00000384473 103 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 MIR548E-201ENST00000408287 88 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
SYNE4Q8N205 MIR518A1-201ENST00000385068 85 ntBASIC0.65□□□□□ -2.31
SYNE4Q8N205 RNU6-630P-201ENST00000391258 106 ntBASIC0.65□□□□□ -2.31
SYNE4Q8N205 RNU6-656P-201ENST00000516785 107 ntBASIC0.65□□□□□ -2.31
SYNE4Q8N205 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SYNE4Q8N205 RNU6-1216P-201ENST00000362590 107 ntBASIC0.64□□□□□ -2.31
SYNE4Q8N205 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
SYNE4Q8N205 Y_RNA.443-201ENST00000384135 111 ntBASIC0.64□□□□□ -2.31
SYNE4Q8N205 SCARNA17.3-201ENST00000516381 125 ntBASIC0.64□□□□□ -2.31
SYNE4Q8N205 RNU6-590P-201ENST00000365039 107 ntBASIC0.63□□□□□ -2.31
SYNE4Q8N205 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SYNE4Q8N205 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
SYNE4Q8N205 MIR501-201ENST00000390204 84 ntBASIC0.62□□□□□ -2.31
SYNE4Q8N205 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
SYNE4Q8N205 Y_RNA.125-201ENST00000363371 111 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 VTRNA1-3-201ENST00000365645 89 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 RNA5SP63-201ENST00000391225 112 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 AC021146.9-201ENST00000512503 156 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 MIR6739-201ENST00000622461 75 ntBASIC0.61□□□□□ -2.31
SYNE4Q8N205 SNORA33.1-201ENST00000364957 130 ntBASIC0.6□□□□□ -2.31
SYNE4Q8N205 Y_RNA.340-201ENST00000365330 92 ntBASIC0.6□□□□□ -2.31
SYNE4Q8N205 Y_RNA.633-201ENST00000459107 95 ntBASIC0.6□□□□□ -2.31
SYNE4Q8N205 SNORA68.3-201ENST00000515906 83 ntBASIC0.59□□□□□ -2.31
SYNE4Q8N205 AC090617.8-201ENST00000623339 167 ntBASIC0.59□□□□□ -2.31
SYNE4Q8N205 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE4Q8N205 SNORD114-4-201ENST00000363962 75 ntBASIC0.58□□□□□ -2.32
SYNE4Q8N205 SNORA2A-201ENST00000383885 135 ntBASIC0.58□□□□□ -2.32
SYNE4Q8N205 SNORA49-201ENST00000386157 136 ntBASIC0.58□□□□□ -2.32
SYNE4Q8N205 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
SYNE4Q8N205 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
SYNE4Q8N205 MIR4677-201ENST00000584153 80 ntBASIC0.58□□□□□ -2.32
SYNE4Q8N205 MIR103A1-201ENST00000362165 78 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 SNORA25.4-201ENST00000363666 124 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 MIR9-2-201ENST00000384838 87 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 RNU7-188P-201ENST00000517063 64 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 MIR5706-201ENST00000579841 80 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 uc_338.10-201ENST00000621872 182 ntBASIC0.57□□□□□ -2.32
SYNE4Q8N205 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
SYNE4Q8N205 RNU6-668P-201ENST00000364180 107 ntBASIC0.56□□□□□ -2.32
SYNE4Q8N205 MIR516B1-201ENST00000385211 90 ntBASIC0.56□□□□□ -2.32
SYNE4Q8N205 RNU6-175P-201ENST00000516896 107 ntBASIC0.56□□□□□ -2.32
SYNE4Q8N205 MIR499B-201ENST00000636498 73 ntBASIC0.56□□□□□ -2.32
SYNE4Q8N205 MIR4636-201ENST00000582271 80 ntBASIC0.55□□□□□ -2.32
SYNE4Q8N205 MIR3925-201ENST00000584674 77 ntBASIC0.55□□□□□ -2.32
SYNE4Q8N205 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE4Q8N205 MIR521-2-201ENST00000384818 87 ntBASIC0.54□□□□□ -2.32
SYNE4Q8N205 MTND4LP1-201ENST00000446263 157 ntBASIC0.54□□□□□ -2.32
SYNE4Q8N205 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
SYNE4Q8N205 MIR6759-201ENST00000638110 65 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 421.5 ms