Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 SNORD77.2-201ENST00000391045 68 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 MIR8053-201ENST00000613344 75 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 AL050303.3-201ENST00000613704 284 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 AC068137.3-201ENST00000639191 341 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 RNU6-636P-201ENST00000384598 107 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-510P-201ENST00000391239 108 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-182P-201ENST00000516970 105 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 MIR513B-201ENST00000385136 84 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-172P-201ENST00000411000 93 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-561P-201ENST00000516222 102 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.17□□□□□ -2.76
VPS13DQ5THJ4 MTND5P5-201ENST00000503764 376 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 RNU6-276P-201ENST00000516114 96 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 AP000240.1-201ENST00000609910 452 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 MIR1321-201ENST00000637766 79 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 RNU6-500P-201ENST00000362349 107 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 SNORD116.1-201ENST00000365628 92 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 SNORD58A-201ENST00000383875 65 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 MIR3149-201ENST00000584629 83 ntBASIC-2.18□□□□□ -2.76
VPS13DQ5THJ4 AL451105.1-201ENST00000450005 189 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-256P-201ENST00000516747 97 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-789P-201ENST00000517105 102 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 snoU18.1-201ENST00000629629 71 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 MIR4796-201ENST00000580742 81 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-89P-201ENST00000606519 100 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 SNORD45B-201ENST00000364617 72 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-307P-201ENST00000516743 106 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 RNU6-303P-201ENST00000517091 106 ntBASIC-2.19□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.2□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.2□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.2□□□□□ -2.76
VPS13DQ5THJ4 MIR124-1-201ENST00000385275 85 ntBASIC-2.2□□□□□ -2.76
VPS13DQ5THJ4 RNU6-810P-201ENST00000364001 107 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 MIR577-201ENST00000385196 96 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 MIR5009-201ENST00000578736 100 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 MIR3675-201ENST00000583661 73 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 RNU6-686P-201ENST00000364839 107 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 AC139453.2-201ENST00000487255 133 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 RNU6-648P-201ENST00000410190 107 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 RNU7-66P-201ENST00000459469 62 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 SCARNA23-201ENST00000516060 130 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.21□□□□□ -2.76
VPS13DQ5THJ4 RNU6-493P-201ENST00000391321 108 ntBASIC-2.22□□□□□ -2.76
VPS13DQ5THJ4 MIR548F5-201ENST00000408421 86 ntBASIC-2.22□□□□□ -2.76
VPS13DQ5THJ4 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.22□□□□□ -2.76
VPS13DQ5THJ4 SNORD2.1-201ENST00000458762 69 ntBASIC-2.22□□□□□ -2.76
VPS13DQ5THJ4 AC099799.1-201ENST00000439809 192 ntBASIC-2.22□□□□□ -2.77
VPS13DQ5THJ4 RNU6-92P-201ENST00000605893 104 ntBASIC-2.22□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 RNA5SP224-201ENST00000365069 126 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 Z69908.1-201ENST00000622603 247 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 MIR4777-201ENST00000583710 86 ntBASIC-2.23□□□□□ -2.77
VPS13DQ5THJ4 SNORD116-2-201ENST00000384274 95 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 NBR2-204ENST00000587322 63 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 SNORD115-46-201ENST00000390982 71 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 RNU7-119P-201ENST00000459279 63 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 RNA5SP136-201ENST00000410906 107 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 RNU6-557P-201ENST00000516842 110 ntBASIC-2.24□□□□□ -2.77
VPS13DQ5THJ4 RNU6-776P-201ENST00000364403 104 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 RNU6-813P-201ENST00000384691 107 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 MIR656-201ENST00000385224 78 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 MTND1P29-201ENST00000448112 647 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 AC103810.7-201ENST00000607821 91 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 RNU6-624P-201ENST00000363411 107 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 MIR548AB-201ENST00000584917 84 ntBASIC-2.25□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-508P-201ENST00000363231 103 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-742P-201ENST00000365289 107 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-578P-201ENST00000390980 103 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 SNORD116.2-201ENST00000391251 93 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 382 ms