Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-630P-201ENST00000391258 106 ntBASIC-3.4□□□□□ -2.95
TPM4P67936 MIR3613-201ENST00000579844 87 ntBASIC-3.4□□□□□ -2.95
TPM4P67936 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.4□□□□□ -2.95
TPM4P67936 MIR548AM-201ENST00000584298 74 ntBASIC-3.4□□□□□ -2.95
TPM4P67936 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.41□□□□□ -2.96
TPM4P67936 MTND5P20-201ENST00000448677 143 ntBASIC-3.41□□□□□ -2.96
TPM4P67936 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.42□□□□□ -2.96
TPM4P67936 Y_RNA.145-201ENST00000363527 102 ntBASIC-3.42□□□□□ -2.96
TPM4P67936 SNORA33.2-201ENST00000365413 134 ntBASIC-3.42□□□□□ -2.96
TPM4P67936 AL158147.1-201ENST00000443970 75 ntBASIC-3.42□□□□□ -2.96
TPM4P67936 MIR3171-201ENST00000584270 74 ntBASIC-3.42□□□□□ -2.96
TPM4P67936 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.43□□□□□ -2.96
TPM4P67936 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.43□□□□□ -2.96
TPM4P67936 RNU4-71P-201ENST00000516258 113 ntBASIC-3.43□□□□□ -2.96
TPM4P67936 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.43□□□□□ -2.96
TPM4P67936 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.44□□□□□ -2.96
TPM4P67936 RNU6-563P-201ENST00000364872 108 ntBASIC-3.44□□□□□ -2.96
TPM4P67936 RNU6-980P-201ENST00000516925 103 ntBASIC-3.44□□□□□ -2.96
TPM4P67936 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.44□□□□□ -2.96
TPM4P67936 U2.7-201ENST00000619197 100 ntBASIC-3.44□□□□□ -2.96
TPM4P67936 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.45□□□□□ -2.96
TPM4P67936 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.45□□□□□ -2.96
TPM4P67936 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.46□□□□□ -2.96
TPM4P67936 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.46□□□□□ -2.96
TPM4P67936 RNU6-752P-201ENST00000516376 102 ntBASIC-3.46□□□□□ -2.96
TPM4P67936 AC025166.1-201ENST00000612411 163 ntBASIC-3.46□□□□□ -2.96
TPM4P67936 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.47□□□□□ -2.96
TPM4P67936 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.47□□□□□ -2.96
TPM4P67936 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.47□□□□□ -2.96
TPM4P67936 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.47□□□□□ -2.96
TPM4P67936 AC120024.2-201ENST00000576526 175 ntBASIC-3.47□□□□□ -2.96
TPM4P67936 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.48□□□□□ -2.97
TPM4P67936 AP001340.1-201ENST00000624405 217 ntBASIC-3.48□□□□□ -2.97
TPM4P67936 RNU6-458P-201ENST00000384179 107 ntBASIC-3.49□□□□□ -2.97
TPM4P67936 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.49□□□□□ -2.97
TPM4P67936 RNU6-696P-201ENST00000390834 107 ntBASIC-3.49□□□□□ -2.97
TPM4P67936 RNU6-656P-201ENST00000516785 107 ntBASIC-3.49□□□□□ -2.97
TPM4P67936 U6.58-201ENST00000613107 107 ntBASIC-3.49□□□□□ -2.97
TPM4P67936 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 RNU6-639P-201ENST00000384074 107 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 RNU4-88P-201ENST00000411220 86 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 AL118496.2-201ENST00000448300 230 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 RNU6-807P-201ENST00000516805 107 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 AC020661.2-201ENST00000560114 134 ntBASIC-3.5□□□□□ -2.97
TPM4P67936 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.51□□□□□ -2.97
TPM4P67936 MTATP8P1-201ENST00000467115 207 ntBASIC-3.51□□□□□ -2.97
TPM4P67936 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.51□□□□□ -2.97
TPM4P67936 AC022559.1-201ENST00000520905 205 ntBASIC-3.51□□□□□ -2.97
TPM4P67936 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 Y_RNA.288-201ENST00000364854 92 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 MIR4679-2-201ENST00000578358 77 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 MIR23C-201ENST00000579846 100 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 Y_RNA.804-201ENST00000615262 101 ntBASIC-3.52□□□□□ -2.97
TPM4P67936 MIR1468-201ENST00000410600 86 ntBASIC-3.53□□□□□ -2.97
TPM4P67936 AL035470.1-201ENST00000622571 220 ntBASIC-3.54□□□□□ -2.98
TPM4P67936 RNA5SP405-201ENST00000363059 114 ntBASIC-3.55□□□□□ -2.98
TPM4P67936 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.55□□□□□ -2.98
TPM4P67936 SNORA81.3-201ENST00000517283 198 ntBASIC-3.55□□□□□ -2.98
TPM4P67936 SNORD58C-201ENST00000365223 64 ntBASIC-3.56□□□□□ -2.98
TPM4P67936 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.56□□□□□ -2.98
TPM4P67936 RNU6-258P-201ENST00000390884 101 ntBASIC-3.56□□□□□ -2.98
TPM4P67936 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.57□□□□□ -2.98
TPM4P67936 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.57□□□□□ -2.98
TPM4P67936 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 MIR513C-201ENST00000401352 84 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 Y_RNA.674-201ENST00000516362 113 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 MIR4796-201ENST00000580742 81 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 MIR4777-201ENST00000583710 86 ntBASIC-3.58□□□□□ -2.98
TPM4P67936 Y_RNA.55-201ENST00000362797 102 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 Y_RNA.413-201ENST00000384007 102 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 RNU6-880P-201ENST00000384526 107 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 Y_RNA.754-201ENST00000476024 102 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 U7.2-201ENST00000607576 63 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 Y_RNA.790-201ENST00000614282 102 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 Y_RNA.782-201ENST00000614695 102 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 AC141273.2-201ENST00000618989 130 ntBASIC-3.59□□□□□ -2.98
TPM4P67936 Y_RNA.375-201ENST00000365625 101 ntBASIC-3.6□□□□□ -2.99
TPM4P67936 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.6□□□□□ -2.99
TPM4P67936 AC072026.1-201ENST00000605023 201 ntBASIC-3.6□□□□□ -2.99
TPM4P67936 AL627230.5-201ENST00000619807 58 ntBASIC-3.6□□□□□ -2.99
TPM4P67936 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.61□□□□□ -2.99
TPM4P67936 RNU6-598P-201ENST00000364017 105 ntBASIC-3.61□□□□□ -2.99
TPM4P67936 RNU4-40P-201ENST00000364351 143 ntBASIC-3.61□□□□□ -2.99
TPM4P67936 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.61□□□□□ -2.99
TPM4P67936 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.61□□□□□ -2.99
TPM4P67936 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.62□□□□□ -2.99
TPM4P67936 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.62□□□□□ -2.99
TPM4P67936 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.62□□□□□ -2.99
TPM4P67936 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.63□□□□□ -2.99
TPM4P67936 Y_RNA.346-201ENST00000365385 112 ntBASIC-3.63□□□□□ -2.99
TPM4P67936 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.63□□□□□ -2.99
TPM4P67936 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.64□□□□□ -2.99
TPM4P67936 RNU6-194P-201ENST00000363862 105 ntBASIC-3.64□□□□□ -2.99
TPM4P67936 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.65□□□□□ -2.99
TPM4P67936 RNU6-118P-201ENST00000516552 102 ntBASIC-3.65□□□□□ -2.99
TPM4P67936 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.66□□□□□ -3
TPM4P67936 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.66□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms