Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 uc_338.36-201ENST00000622331 158 ntBASIC-0.36□□□□□ -2.47
TNFRSF4P43489 MIR4773-1-201ENST00000637203 78 ntBASIC-0.36□□□□□ -2.47
TNFRSF4P43489 RNU6-755P-201ENST00000364400 103 ntBASIC-0.37□□□□□ -2.47
TNFRSF4P43489 MIR9-2-201ENST00000384838 87 ntBASIC-0.37□□□□□ -2.47
TNFRSF4P43489 AL445193.1-201ENST00000441183 141 ntBASIC-0.37□□□□□ -2.47
TNFRSF4P43489 MIR548AX-201ENST00000580117 73 ntBASIC-0.37□□□□□ -2.47
TNFRSF4P43489 AL627230.5-201ENST00000619807 58 ntBASIC-0.37□□□□□ -2.47
TNFRSF4P43489 RNU6-382P-201ENST00000365181 106 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 RNU6-900P-201ENST00000384498 102 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 SNORD20-201ENST00000384550 80 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 MIR519C-201ENST00000385053 87 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 RNU7-24P-201ENST00000458867 62 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 AC021146.9-201ENST00000512503 156 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 RNU7-153P-201ENST00000516455 62 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 RNU6-919P-201ENST00000516731 104 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 SNORA40.17-201ENST00000517256 115 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 AP001318.4-201ENST00000616637 121 ntBASIC-0.38□□□□□ -2.47
TNFRSF4P43489 RNU6-990P-201ENST00000364385 104 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU6-215P-201ENST00000365169 102 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU6-32P-201ENST00000383948 107 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU6-13P-201ENST00000384248 107 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU6-12P-201ENST00000384604 107 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU6-41P-201ENST00000384741 107 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 snoU13.13-201ENST00000458842 104 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 RNA5SP66-201ENST00000517178 101 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 AC145423.2-201ENST00000610631 239 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 AL590491.3-201ENST00000610731 82 ntBASIC-0.39□□□□□ -2.47
TNFRSF4P43489 MIR409-201ENST00000362237 79 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 RNU6-824P-201ENST00000363724 104 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 SNORD115-27-201ENST00000364430 82 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 snoU13.17-201ENST00000458802 104 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 RNU6-274P-201ENST00000459566 107 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 RNA5SP67-201ENST00000516422 131 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 U2.22-201ENST00000636441 106 ntBASIC-0.4□□□□□ -2.47
TNFRSF4P43489 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 SNORD115-37-201ENST00000363768 82 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 AL035461.1-201ENST00000421490 332 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.41□□□□□ -2.48
TNFRSF4P43489 MIR4668-201ENST00000582284 70 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 MALAT1.1-201ENST00000618249 95 ntBASIC-0.41□□□□□ -2.48
TNFRSF4P43489 RNA5SP331-201ENST00000364986 107 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 MIR203A-201ENST00000384836 110 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 AL450471.1-201ENST00000447509 127 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 MIR6509-201ENST00000614603 85 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 AC093726.3-201ENST00000637588 150 ntBASIC-0.42□□□□□ -2.48
TNFRSF4P43489 RNU6-502P-201ENST00000362419 108 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 RNU6-147P-201ENST00000383983 107 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 AL691482.2-201ENST00000457453 84 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.43□□□□□ -2.48
TNFRSF4P43489 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 RNU6-44P-201ENST00000384045 107 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 RNU7-55P-201ENST00000459426 62 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 RNA5SP147-201ENST00000516493 109 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 MIR6773-201ENST00000612812 74 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 snoR1.1-201ENST00000628177 80 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 U6.96-201ENST00000636425 70 ntBASIC-0.44□□□□□ -2.48
TNFRSF4P43489 RNU6-208P-201ENST00000362431 107 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 SNORD116-22-201ENST00000384430 92 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 SNORD56B-201ENST00000384713 71 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 U6.81-201ENST00000612550 106 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 AL391099.1-201ENST00000624635 187 ntBASIC-0.45□□□□□ -2.48
TNFRSF4P43489 RNU6-633P-201ENST00000362612 103 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 RNU6-973P-201ENST00000364690 107 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 RNU6-260P-201ENST00000384092 107 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 RNA5SP266-201ENST00000410273 108 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 AC114755.3-201ENST00000481111 251 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.46□□□□□ -2.48
TNFRSF4P43489 MIR204-201ENST00000385200 110 ntBASIC-0.47□□□□□ -2.48
TNFRSF4P43489 SNORD77.2-201ENST00000391045 68 ntBASIC-0.47□□□□□ -2.48
TNFRSF4P43489 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
TNFRSF4P43489 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.47□□□□□ -2.48
TNFRSF4P43489 SNORA2.1-201ENST00000363089 137 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 RNU6-640P-201ENST00000363693 105 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
TNFRSF4P43489 RNU6-402P-201ENST00000410678 103 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 MIR3657-201ENST00000584818 117 ntBASIC-0.48□□□□□ -2.49
TNFRSF4P43489 MIR488-201ENST00000365739 83 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 RNU6-905P-201ENST00000384434 107 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 MIRLET7B-201ENST00000385140 83 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 RNU6-592P-201ENST00000411333 103 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 RNY1P9-201ENST00000532431 109 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 MIR3681-201ENST00000580089 72 ntBASIC-0.49□□□□□ -2.49
TNFRSF4P43489 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
TNFRSF4P43489 SNORD57-201ENST00000448188 72 ntBASIC-0.5□□□□□ -2.49
TNFRSF4P43489 AC093729.1-201ENST00000513074 128 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms