Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR548E-201ENST00000408287 88 ntBASIC-0.02□□□□□ -2.41
MMP3P08254 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
MMP3P08254 AC140658.3-201ENST00000567603 271 ntBASIC-0.02□□□□□ -2.41
MMP3P08254 MIR203A-201ENST00000384836 110 ntBASIC-0.03□□□□□ -2.41
MMP3P08254 SNORD77.2-201ENST00000391045 68 ntBASIC-0.03□□□□□ -2.41
MMP3P08254 RNU6-180P-201ENST00000516697 61 ntBASIC-0.03□□□□□ -2.41
MMP3P08254 AC006254.2-201ENST00000603259 279 ntBASIC-0.03□□□□□ -2.41
MMP3P08254 AC006160.2-201ENST00000637708 154 ntBASIC-0.03□□□□□ -2.41
MMP3P08254 SNORD114-4-201ENST00000363962 75 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 MIR1265-201ENST00000408444 86 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 AC244090.1-201ENST00000441884 93 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 RNU7-165P-201ENST00000458864 60 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 U6.81-201ENST00000612550 106 ntBASIC-0.04□□□□□ -2.42
MMP3P08254 SNORA49-201ENST00000386157 136 ntBASIC-0.05□□□□□ -2.42
MMP3P08254 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.05□□□□□ -2.42
MMP3P08254 CR383656.4-201ENST00000546909 122 ntBASIC-0.05□□□□□ -2.42
MMP3P08254 snoU13.13-201ENST00000458842 104 ntBASIC-0.06□□□□□ -2.42
MMP3P08254 RNU7-24P-201ENST00000458867 62 ntBASIC-0.06□□□□□ -2.42
MMP3P08254 AC022137.1-201ENST00000483735 151 ntBASIC-0.06□□□□□ -2.42
MMP3P08254 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
MMP3P08254 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.07□□□□□ -2.42
MMP3P08254 RNU6-274P-201ENST00000459566 107 ntBASIC-0.07□□□□□ -2.42
MMP3P08254 RNA5SP147-201ENST00000516493 109 ntBASIC-0.07□□□□□ -2.42
MMP3P08254 MIR5588-201ENST00000581890 63 ntBASIC-0.07□□□□□ -2.42
MMP3P08254 RNU6-624P-201ENST00000363411 107 ntBASIC-0.08□□□□□ -2.42
MMP3P08254 AL691482.2-201ENST00000457453 84 ntBASIC-0.08□□□□□ -2.42
MMP3P08254 AP000676.1-201ENST00000533307 52 ntBASIC-0.08□□□□□ -2.42
MMP3P08254 MIR6509-201ENST00000614603 85 ntBASIC-0.08□□□□□ -2.42
MMP3P08254 RNA5SP98-201ENST00000363158 137 ntBASIC-0.09□□□□□ -2.42
MMP3P08254 RNU6-478P-201ENST00000363904 110 ntBASIC-0.09□□□□□ -2.42
MMP3P08254 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.09□□□□□ -2.42
MMP3P08254 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
MMP3P08254 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
MMP3P08254 MIR148A-201ENST00000362215 68 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 RNU6-340P-201ENST00000364005 107 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 RNU6-979P-201ENST00000383896 107 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 MIR450A2-201ENST00000385022 100 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 SNORA40.17-201ENST00000517256 115 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 AC062037.1-201ENST00000605302 128 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 MIR6507-201ENST00000613630 70 ntBASIC-0.1□□□□□ -2.43
MMP3P08254 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 SNORA63.6-201ENST00000364921 119 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 RNU6-592P-201ENST00000411333 103 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 AC021146.9-201ENST00000512503 156 ntBASIC-0.11□□□□□ -2.43
MMP3P08254 RNU6-129P-201ENST00000391022 107 ntBASIC-0.12□□□□□ -2.43
MMP3P08254 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.12□□□□□ -2.43
MMP3P08254 RNU6-260P-201ENST00000384092 107 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 AC244250.2-201ENST00000418731 148 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 YWHAEP3-201ENST00000582767 121 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 MIR3657-201ENST00000584818 117 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 AC145423.2-201ENST00000610631 239 ntBASIC-0.13□□□□□ -2.43
MMP3P08254 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.14□□□□□ -2.43
MMP3P08254 IGLVI-20-201ENST00000519296 130 ntBASIC-0.14□□□□□ -2.43
MMP3P08254 SNORD115-25-201ENST00000362619 82 ntBASIC-0.15□□□□□ -2.43
MMP3P08254 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
MMP3P08254 RNU6-686P-201ENST00000364839 107 ntBASIC-0.15□□□□□ -2.43
MMP3P08254 RNU6-557P-201ENST00000516842 110 ntBASIC-0.15□□□□□ -2.43
MMP3P08254 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
MMP3P08254 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 SNORD114-31-201ENST00000363219 75 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 SNORD73B-201ENST00000364394 72 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 MIR4484-201ENST00000582855 83 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
MMP3P08254 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU6-330P-201ENST00000363015 107 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU6-681P-201ENST00000364012 104 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 SNORD114-12-201ENST00000365400 75 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU6-242P-201ENST00000384359 107 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU6-455P-201ENST00000384681 107 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU7-171P-201ENST00000459581 62 ntBASIC-0.17□□□□□ -2.44
MMP3P08254 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.18□□□□□ -2.44
MMP3P08254 SNORA2.1-201ENST00000363089 137 ntBASIC-0.19□□□□□ -2.44
MMP3P08254 RNU6-46P-201ENST00000383860 107 ntBASIC-0.19□□□□□ -2.44
MMP3P08254 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.19□□□□□ -2.44
MMP3P08254 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
MMP3P08254 Z95118.1-201ENST00000421372 247 ntBASIC-0.2□□□□□ -2.44
MMP3P08254 SNORD2-201ENST00000459163 69 ntBASIC-0.2□□□□□ -2.44
MMP3P08254 RNU6-303P-201ENST00000517091 106 ntBASIC-0.2□□□□□ -2.44
MMP3P08254 uc_338.36-201ENST00000622331 158 ntBASIC-0.2□□□□□ -2.44
MMP3P08254 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
MMP3P08254 MIR655-201ENST00000362159 97 ntBASIC-0.21□□□□□ -2.44
MMP3P08254 MIR9-2-201ENST00000384838 87 ntBASIC-0.21□□□□□ -2.44
MMP3P08254 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
MMP3P08254 RNU6-752P-201ENST00000516376 102 ntBASIC-0.21□□□□□ -2.44
MMP3P08254 RNU6-502P-201ENST00000362419 108 ntBASIC-0.22□□□□□ -2.44
MMP3P08254 SNORA33.1-201ENST00000364957 130 ntBASIC-0.22□□□□□ -2.44
MMP3P08254 SNORA8.1-201ENST00000384250 140 ntBASIC-0.22□□□□□ -2.44
MMP3P08254 RNU6-820P-201ENST00000384273 107 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms