Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.82□□□□□ -3.02
CHD1O14646 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.83□□□□□ -3.02
CHD1O14646 SNORD113-3-201ENST00000364830 72 ntBASIC-3.83□□□□□ -3.02
CHD1O14646 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.83□□□□□ -3.02
CHD1O14646 RNU6-768P-201ENST00000384683 107 ntBASIC-3.83□□□□□ -3.02
CHD1O14646 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.83□□□□□ -3.02
CHD1O14646 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.84□□□□□ -3.02
CHD1O14646 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.84□□□□□ -3.02
CHD1O14646 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.84□□□□□ -3.02
CHD1O14646 AC090582.1-201ENST00000636321 199 ntBASIC-3.84□□□□□ -3.02
CHD1O14646 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.85□□□□□ -3.03
CHD1O14646 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.85□□□□□ -3.03
CHD1O14646 SNORD116-2-201ENST00000384274 95 ntBASIC-3.86□□□□□ -3.03
CHD1O14646 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.86□□□□□ -3.03
CHD1O14646 Y_RNA.9-201ENST00000362354 101 ntBASIC-3.87□□□□□ -3.03
CHD1O14646 U6.81-201ENST00000612550 106 ntBASIC-3.87□□□□□ -3.03
CHD1O14646 RNU6-587P-201ENST00000391282 106 ntBASIC-3.87□□□□□ -3.03
CHD1O14646 RNU6-644P-201ENST00000391155 98 ntBASIC-3.88□□□□□ -3.03
CHD1O14646 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.88□□□□□ -3.03
CHD1O14646 RNU7-174P-201ENST00000516248 59 ntBASIC-3.88□□□□□ -3.03
CHD1O14646 MIR3646-201ENST00000578301 84 ntBASIC-3.88□□□□□ -3.03
CHD1O14646 MIR3144-201ENST00000579460 79 ntBASIC-3.88□□□□□ -3.03
CHD1O14646 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.88□□□□□ -3.03
CHD1O14646 SNORD60-201ENST00000383903 83 ntBASIC-3.89□□□□□ -3.03
CHD1O14646 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.89□□□□□ -3.03
CHD1O14646 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.89□□□□□ -3.03
CHD1O14646 RNU6-506P-201ENST00000516553 94 ntBASIC-3.89□□□□□ -3.03
CHD1O14646 MIR369-201ENST00000362155 70 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 RNU6-121P-201ENST00000410525 99 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 RNU6-752P-201ENST00000516376 102 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 RNU6-995P-201ENST00000391244 107 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 AC002553.4-201ENST00000616896 331 ntBASIC-3.9□□□□□ -3.03
CHD1O14646 MIR548C-201ENST00000384815 97 ntBASIC-3.91□□□□□ -3.04
CHD1O14646 MIR577-201ENST00000385196 96 ntBASIC-3.91□□□□□ -3.04
CHD1O14646 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.91□□□□□ -3.04
CHD1O14646 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.92□□□□□ -3.04
CHD1O14646 MIR548D2-201ENST00000384955 97 ntBASIC-3.92□□□□□ -3.04
CHD1O14646 RNA5SP136-201ENST00000410906 107 ntBASIC-3.92□□□□□ -3.04
CHD1O14646 AC104985.2-201ENST00000620598 500 ntBASIC-3.92□□□□□ -3.04
CHD1O14646 MIR3121-201ENST00000579680 77 ntBASIC-3.92□□□□□ -3.04
CHD1O14646 MIR4282-201ENST00000583613 67 ntBASIC-3.93□□□□□ -3.04
CHD1O14646 MIR4439-201ENST00000583746 80 ntBASIC-3.93□□□□□ -3.04
CHD1O14646 RNU6-770P-201ENST00000363929 105 ntBASIC-3.94□□□□□ -3.04
CHD1O14646 RNY1P1-201ENST00000364372 112 ntBASIC-3.94□□□□□ -3.04
CHD1O14646 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.94□□□□□ -3.04
CHD1O14646 AC113139.1-201ENST00000605049 239 ntBASIC-3.94□□□□□ -3.04
CHD1O14646 RNU6-834P-201ENST00000362367 110 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 SNORA75.5-201ENST00000391291 81 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 RNY3P8-201ENST00000411366 126 ntBASIC-3.95□□□□□ -3.04
CHD1O14646 RNU6-669P-201ENST00000365575 107 ntBASIC-3.97□□□□□ -3.04
CHD1O14646 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.97□□□□□ -3.04
CHD1O14646 RNU7-151P-201ENST00000516930 53 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR581-201ENST00000384895 96 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR1302-11-201ENST00000408051 138 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR1302-9-201ENST00000408365 138 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR1302-10-201ENST00000408734 138 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR3149-201ENST00000584629 83 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 MIR1302-2-201ENST00000607096 138 ntBASIC-3.98□□□□□ -3.05
CHD1O14646 RNU6-698P-201ENST00000363523 107 ntBASIC-3.99□□□□□ -3.05
CHD1O14646 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.99□□□□□ -3.05
CHD1O14646 RNU6-34P-201ENST00000364874 107 ntBASIC-3.99□□□□□ -3.05
CHD1O14646 RNU6-800P-201ENST00000384473 103 ntBASIC-3.99□□□□□ -3.05
CHD1O14646 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.99□□□□□ -3.05
CHD1O14646 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.99□□□□□ -3.05
CHD1O14646 RNU6-645P-201ENST00000364649 106 ntBASIC-4□□□□□ -3.05
CHD1O14646 Y_RNA.337-201ENST00000365312 102 ntBASIC-4□□□□□ -3.05
CHD1O14646 U4.4-201ENST00000620626 117 ntBASIC-4□□□□□ -3.05
CHD1O14646 Y_RNA.395-201ENST00000383945 109 ntBASIC-4.01□□□□□ -3.05
CHD1O14646 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-4.01□□□□□ -3.05
CHD1O14646 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.01□□□□□ -3.05
CHD1O14646 Y_RNA.718-201ENST00000517110 102 ntBASIC-4.01□□□□□ -3.05
CHD1O14646 MIR3611-201ENST00000584484 83 ntBASIC-4.01□□□□□ -3.05
CHD1O14646 RNU6-912P-201ENST00000363800 104 ntBASIC-4.02□□□□□ -3.05
CHD1O14646 MIR548P-201ENST00000408336 84 ntBASIC-4.02□□□□□ -3.05
CHD1O14646 MTND4P17-201ENST00000470444 350 ntBASIC-4.02□□□□□ -3.05
CHD1O14646 SNORD63.2-201ENST00000516303 64 ntBASIC-4.03□□□□□ -3.05
CHD1O14646 RNY3P15-201ENST00000516297 97 ntBASIC-4.04□□□□□ -3.06
CHD1O14646 RNU6-340P-201ENST00000364005 107 ntBASIC-4.04□□□□□ -3.06
CHD1O14646 Y_RNA.398-201ENST00000383952 99 ntBASIC-4.04□□□□□ -3.06
CHD1O14646 SNORA40.15-201ENST00000516884 107 ntBASIC-4.04□□□□□ -3.06
CHD1O14646 Y_RNA.84-201ENST00000363011 104 ntBASIC-4.05□□□□□ -3.06
CHD1O14646 RNU6-816P-201ENST00000390914 107 ntBASIC-4.05□□□□□ -3.06
CHD1O14646 RNU6-1268P-201ENST00000391214 107 ntBASIC-4.05□□□□□ -3.06
CHD1O14646 RNU6-1239P-201ENST00000391310 107 ntBASIC-4.05□□□□□ -3.06
CHD1O14646 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.05□□□□□ -3.06
CHD1O14646 MIR379-201ENST00000362218 67 ntBASIC-4.06□□□□□ -3.06
CHD1O14646 SNORD113-2-201ENST00000391082 72 ntBASIC-4.06□□□□□ -3.06
CHD1O14646 RNY3P16-201ENST00000516338 101 ntBASIC-4.06□□□□□ -3.06
CHD1O14646 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.06□□□□□ -3.06
CHD1O14646 Y_RNA.467-201ENST00000384297 102 ntBASIC-4.07□□□□□ -3.06
CHD1O14646 SNORD45B-201ENST00000364617 72 ntBASIC-4.07□□□□□ -3.06
CHD1O14646 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.07□□□□□ -3.06
CHD1O14646 Y_RNA.259-201ENST00000364619 101 ntBASIC-4.08□□□□□ -3.06
CHD1O14646 MIR548N-201ENST00000408742 75 ntBASIC-4.08□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms