Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-1152P-201ENST00000384576 107 ntBASIC0.27□□□□□ -2.37
CBX4O00257 MIR652-201ENST00000385278 98 ntBASIC0.27□□□□□ -2.37
CBX4O00257 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.27□□□□□ -2.37
CBX4O00257 SNORD42B-201ENST00000458893 67 ntBASIC0.27□□□□□ -2.37
CBX4O00257 SCARNA17.3-201ENST00000516381 125 ntBASIC0.27□□□□□ -2.37
CBX4O00257 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
CBX4O00257 MIR643-201ENST00000385267 97 ntBASIC0.26□□□□□ -2.37
CBX4O00257 RNA5SP299-201ENST00000391203 116 ntBASIC0.26□□□□□ -2.37
CBX4O00257 Y_RNA.606-201ENST00000410579 103 ntBASIC0.26□□□□□ -2.37
CBX4O00257 Y_RNA.316-201ENST00000365118 111 ntBASIC0.25□□□□□ -2.37
CBX4O00257 snoU13.19-201ENST00000459148 104 ntBASIC0.25□□□□□ -2.37
CBX4O00257 MIR20A-201ENST00000362279 71 ntBASIC0.24□□□□□ -2.37
CBX4O00257 RNU6-340P-201ENST00000364005 107 ntBASIC0.24□□□□□ -2.37
CBX4O00257 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
CBX4O00257 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
CBX4O00257 SCARNA11.2-201ENST00000517183 154 ntBASIC0.24□□□□□ -2.37
CBX4O00257 MIR3925-201ENST00000584674 77 ntBASIC0.24□□□□□ -2.37
CBX4O00257 RNU6-315P-201ENST00000362666 107 ntBASIC0.23□□□□□ -2.37
CBX4O00257 RNU7-188P-201ENST00000517063 64 ntBASIC0.23□□□□□ -2.37
CBX4O00257 MIR4666B-201ENST00000578142 81 ntBASIC0.23□□□□□ -2.37
CBX4O00257 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
CBX4O00257 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.23□□□□□ -2.37
CBX4O00257 MIRLET7A1-201ENST00000362295 80 ntBASIC0.22□□□□□ -2.37
CBX4O00257 RNU6-478P-201ENST00000363904 110 ntBASIC0.22□□□□□ -2.37
CBX4O00257 Y_RNA.388-201ENST00000383919 113 ntBASIC0.22□□□□□ -2.37
CBX4O00257 MIR876-201ENST00000401147 81 ntBASIC0.22□□□□□ -2.37
CBX4O00257 AL691482.2-201ENST00000457453 84 ntBASIC0.22□□□□□ -2.37
CBX4O00257 RNU6-752P-201ENST00000516376 102 ntBASIC0.22□□□□□ -2.37
CBX4O00257 MIR4802-201ENST00000581881 80 ntBASIC0.22□□□□□ -2.37
CBX4O00257 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CBX4O00257 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
CBX4O00257 RNA5SP173-201ENST00000364857 136 ntBASIC0.21□□□□□ -2.38
CBX4O00257 AC244090.1-201ENST00000441884 93 ntBASIC0.21□□□□□ -2.38
CBX4O00257 Y_RNA.185-201ENST00000363894 100 ntBASIC0.2□□□□□ -2.38
CBX4O00257 RNU6-30P-201ENST00000384561 107 ntBASIC0.2□□□□□ -2.38
CBX4O00257 RNU6-303P-201ENST00000517091 106 ntBASIC0.2□□□□□ -2.38
CBX4O00257 MIR5190-201ENST00000581537 80 ntBASIC0.2□□□□□ -2.38
CBX4O00257 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
CBX4O00257 MIR3202-2-201ENST00000635980 79 ntBASIC0.2□□□□□ -2.38
CBX4O00257 MIR1245B-201ENST00000636115 69 ntBASIC0.2□□□□□ -2.38
CBX4O00257 RNA5SP98-201ENST00000363158 137 ntBASIC0.19□□□□□ -2.38
CBX4O00257 RNU6-1039P-201ENST00000383931 107 ntBASIC0.19□□□□□ -2.38
CBX4O00257 MIR6509-201ENST00000614603 85 ntBASIC0.19□□□□□ -2.38
CBX4O00257 RNU6-1094P-201ENST00000362416 104 ntBASIC0.18□□□□□ -2.38
CBX4O00257 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
CBX4O00257 RNU6-807P-201ENST00000516805 107 ntBASIC0.18□□□□□ -2.38
CBX4O00257 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
CBX4O00257 SNORD2-201ENST00000459163 69 ntBASIC0.17□□□□□ -2.38
CBX4O00257 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
CBX4O00257 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
CBX4O00257 MIR1297-201ENST00000637311 77 ntBASIC0.17□□□□□ -2.38
CBX4O00257 Z95118.1-201ENST00000421372 247 ntBASIC0.16□□□□□ -2.38
CBX4O00257 MIR4712-201ENST00000583750 82 ntBASIC0.16□□□□□ -2.38
CBX4O00257 Y_RNA.219-201ENST00000364232 113 ntBASIC0.15□□□□□ -2.39
CBX4O00257 RNU6-573P-201ENST00000383938 106 ntBASIC0.15□□□□□ -2.39
CBX4O00257 MIR593-201ENST00000384856 100 ntBASIC0.15□□□□□ -2.39
CBX4O00257 MIR548H2-201ENST00000408874 88 ntBASIC0.15□□□□□ -2.39
CBX4O00257 SNORA72.7-201ENST00000516349 94 ntBASIC0.15□□□□□ -2.39
CBX4O00257 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
CBX4O00257 RNU6-260P-201ENST00000384092 107 ntBASIC0.14□□□□□ -2.39
CBX4O00257 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.14□□□□□ -2.39
CBX4O00257 RNU6-990P-201ENST00000364385 104 ntBASIC0.13□□□□□ -2.39
CBX4O00257 RNA5SP163-201ENST00000410304 99 ntBASIC0.13□□□□□ -2.39
CBX4O00257 RNA5SP25-201ENST00000410815 110 ntBASIC0.13□□□□□ -2.39
CBX4O00257 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.13□□□□□ -2.39
CBX4O00257 RN7SL660P-201ENST00000614852 299 ntBASIC0.13□□□□□ -2.39
CBX4O00257 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
CBX4O00257 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
CBX4O00257 Y_RNA.313-201ENST00000365095 103 ntBASIC0.12□□□□□ -2.39
CBX4O00257 RNU6-787P-201ENST00000384032 107 ntBASIC0.12□□□□□ -2.39
CBX4O00257 MIR203A-201ENST00000384836 110 ntBASIC0.12□□□□□ -2.39
CBX4O00257 MIR548E-201ENST00000408287 88 ntBASIC0.12□□□□□ -2.39
CBX4O00257 RNU6-758P-201ENST00000516292 89 ntBASIC0.12□□□□□ -2.39
CBX4O00257 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
CBX4O00257 SNORA63.6-201ENST00000364921 119 ntBASIC0.11□□□□□ -2.39
CBX4O00257 MIR582-201ENST00000365731 98 ntBASIC0.11□□□□□ -2.39
CBX4O00257 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
CBX4O00257 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CBX4O00257 AC074348.1-201ENST00000426503 132 ntBASIC0.11□□□□□ -2.39
CBX4O00257 RNU6-175P-201ENST00000516896 107 ntBASIC0.11□□□□□ -2.39
CBX4O00257 MIR3657-201ENST00000584818 117 ntBASIC0.11□□□□□ -2.39
CBX4O00257 RNA5SP368-201ENST00000364298 116 ntBASIC0.1□□□□□ -2.39
CBX4O00257 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
CBX4O00257 AC021146.9-201ENST00000512503 156 ntBASIC0.1□□□□□ -2.39
CBX4O00257 CR383656.4-201ENST00000546909 122 ntBASIC0.1□□□□□ -2.39
CBX4O00257 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
CBX4O00257 SNORA2.1-201ENST00000363089 137 ntBASIC0.09□□□□□ -2.4
CBX4O00257 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
CBX4O00257 RNU6-1124P-201ENST00000384169 107 ntBASIC0.09□□□□□ -2.4
CBX4O00257 SNORA40.17-201ENST00000517256 115 ntBASIC0.09□□□□□ -2.4
CBX4O00257 IGLVI-20-201ENST00000519296 130 ntBASIC0.09□□□□□ -2.4
CBX4O00257 MIR4484-201ENST00000582855 83 ntBASIC0.09□□□□□ -2.4
CBX4O00257 Y_RNA.250-201ENST00000364542 110 ntBASIC0.08□□□□□ -2.4
CBX4O00257 RNU6-1036P-201ENST00000383959 104 ntBASIC0.08□□□□□ -2.4
CBX4O00257 SNORA8.1-201ENST00000384250 140 ntBASIC0.08□□□□□ -2.4
CBX4O00257 Y_RNA.532-201ENST00000384590 113 ntBASIC0.08□□□□□ -2.4
CBX4O00257 MIR106A-201ENST00000384870 81 ntBASIC0.08□□□□□ -2.4
CBX4O00257 MIR3675-201ENST00000583661 73 ntBASIC0.08□□□□□ -2.4
CBX4O00257 MIR148A-201ENST00000362215 68 ntBASIC0.07□□□□□ -2.4
CBX4O00257 Y_RNA.94-201ENST00000363068 106 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms