Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-806P-201ENST00000365147 105 ntBASIC-3.52□□□□□ -2.97
CHKB-CPT1BH3BT56 MIR548C-201ENST00000384815 97 ntBASIC-3.52□□□□□ -2.97
CHKB-CPT1BH3BT56 AC103810.7-201ENST00000607821 91 ntBASIC-3.52□□□□□ -2.97
CHKB-CPT1BH3BT56 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.52□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.53□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-823P-201ENST00000391042 103 ntBASIC-3.53□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-587P-201ENST00000391282 106 ntBASIC-3.53□□□□□ -2.97
CHKB-CPT1BH3BT56 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.53□□□□□ -2.97
CHKB-CPT1BH3BT56 U6.97-201ENST00000636904 101 ntBASIC-3.53□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-247P-201ENST00000362636 107 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.276-201ENST00000364732 109 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 RNU6-813P-201ENST00000384691 107 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 MIR548AA1-201ENST00000384971 97 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 MTND5P22-201ENST00000458380 195 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 RNY3P16-201ENST00000516338 101 ntBASIC-3.54□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.26-201ENST00000362539 101 ntBASIC-3.55□□□□□ -2.98
CHKB-CPT1BH3BT56 RNU6-645P-201ENST00000364649 106 ntBASIC-3.55□□□□□ -2.98
CHKB-CPT1BH3BT56 RNU6-493P-201ENST00000391321 108 ntBASIC-3.55□□□□□ -2.98
CHKB-CPT1BH3BT56 MTND3P3-201ENST00000505004 126 ntBASIC-3.55□□□□□ -2.98
CHKB-CPT1BH3BT56 AC005520.4-201ENST00000604337 90 ntBASIC-3.55□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.56□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.57□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.57□□□□□ -2.98
CHKB-CPT1BH3BT56 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.57□□□□□ -2.98
CHKB-CPT1BH3BT56 SNORD18C-201ENST00000362704 69 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 SNORA27.2-201ENST00000363365 126 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 RNU6-450P-201ENST00000364654 107 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 MIR548P-201ENST00000408336 84 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 MTND1P19-201ENST00000511780 315 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 MIR3121-201ENST00000579680 77 ntBASIC-3.58□□□□□ -2.98
CHKB-CPT1BH3BT56 MIR1263-201ENST00000408324 86 ntBASIC-3.59□□□□□ -2.98
CHKB-CPT1BH3BT56 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.59□□□□□ -2.98
CHKB-CPT1BH3BT56 RNY3P2-201ENST00000362918 102 ntBASIC-3.6□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-340P-201ENST00000364005 107 ntBASIC-3.6□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-694P-201ENST00000364071 147 ntBASIC-3.6□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.6□□□□□ -2.99
CHKB-CPT1BH3BT56 RNY4-201ENST00000516507 96 ntBASIC-3.6□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 SNORD45B-201ENST00000364617 72 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 MIR4796-201ENST00000580742 81 ntBASIC-3.62□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-681P-201ENST00000364012 104 ntBASIC-3.63□□□□□ -2.99
CHKB-CPT1BH3BT56 MIR3613-201ENST00000579844 87 ntBASIC-3.63□□□□□ -2.99
CHKB-CPT1BH3BT56 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.63□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.64□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.279-201ENST00000364763 95 ntBASIC-3.64□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.64□□□□□ -2.99
CHKB-CPT1BH3BT56 AL450471.1-201ENST00000447509 127 ntBASIC-3.64□□□□□ -2.99
CHKB-CPT1BH3BT56 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.64□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-698P-201ENST00000363523 107 ntBASIC-3.65□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-34P-201ENST00000364874 107 ntBASIC-3.65□□□□□ -2.99
CHKB-CPT1BH3BT56 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-3.65□□□□□ -2.99
CHKB-CPT1BH3BT56 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.65□□□□□ -2.99
CHKB-CPT1BH3BT56 AC130289.1-201ENST00000577321 73 ntBASIC-3.65□□□□□ -2.99
CHKB-CPT1BH3BT56 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.66□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.66□□□□□ -3
CHKB-CPT1BH3BT56 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.66□□□□□ -3
CHKB-CPT1BH3BT56 U4.4-201ENST00000620626 117 ntBASIC-3.66□□□□□ -3
CHKB-CPT1BH3BT56 AL160413.1-201ENST00000622780 310 ntBASIC-3.66□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.67□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.67□□□□□ -3
CHKB-CPT1BH3BT56 MIR1277-201ENST00000408536 78 ntBASIC-3.67□□□□□ -3
CHKB-CPT1BH3BT56 U4.5-201ENST00000617137 123 ntBASIC-3.67□□□□□ -3
CHKB-CPT1BH3BT56 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 RNU6-995P-201ENST00000391244 107 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 AC069439.1-201ENST00000494739 167 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 MIR4643-201ENST00000577473 78 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-3.68□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.69□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.69□□□□□ -3
CHKB-CPT1BH3BT56 RNY3P14-201ENST00000384309 102 ntBASIC-3.69□□□□□ -3
CHKB-CPT1BH3BT56 SNORD37.2-201ENST00000391075 66 ntBASIC-3.69□□□□□ -3
CHKB-CPT1BH3BT56 RNY3P8-201ENST00000411366 126 ntBASIC-3.69□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.7□□□□□ -3
CHKB-CPT1BH3BT56 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-3.7□□□□□ -3
CHKB-CPT1BH3BT56 RNU6-277P-201ENST00000516272 106 ntBASIC-3.7□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.71□□□□□ -3
CHKB-CPT1BH3BT56 RNY1P1-201ENST00000364372 112 ntBASIC-3.71□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.384-201ENST00000383909 102 ntBASIC-3.71□□□□□ -3
CHKB-CPT1BH3BT56 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.71□□□□□ -3
CHKB-CPT1BH3BT56 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.72□□□□□ -3
CHKB-CPT1BH3BT56 SNORD127-201ENST00000458892 86 ntBASIC-3.72□□□□□ -3
CHKB-CPT1BH3BT56 SNORD63.2-201ENST00000516303 64 ntBASIC-3.72□□□□□ -3
CHKB-CPT1BH3BT56 MIR3658-201ENST00000636291 56 ntBASIC-3.72□□□□□ -3
CHKB-CPT1BH3BT56 RNU6-669P-201ENST00000365575 107 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 SNORD116-16-201ENST00000384533 92 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 AC025166.1-201ENST00000612411 163 ntBASIC-3.73□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms