Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RNU6-787P-201ENST00000384032 107 ntBASIC0.47□□□□□ -2.33
PCDHA9Q9Y5H5 MIR1287-201ENST00000408492 90 ntBASIC0.47□□□□□ -2.33
PCDHA9Q9Y5H5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
PCDHA9Q9Y5H5 U6.81-201ENST00000612550 106 ntBASIC0.47□□□□□ -2.33
PCDHA9Q9Y5H5 uc_338.10-201ENST00000621872 182 ntBASIC0.47□□□□□ -2.33
PCDHA9Q9Y5H5 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-681P-201ENST00000364012 104 ntBASIC0.46□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-380P-201ENST00000410207 107 ntBASIC0.46□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.46□□□□□ -2.34
PCDHA9Q9Y5H5 Y_RNA.12-201ENST00000362393 112 ntBASIC0.45□□□□□ -2.34
PCDHA9Q9Y5H5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
PCDHA9Q9Y5H5 MIR548AD-201ENST00000584780 82 ntBASIC0.45□□□□□ -2.34
PCDHA9Q9Y5H5 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-340P-201ENST00000364005 107 ntBASIC0.44□□□□□ -2.34
PCDHA9Q9Y5H5 RNA5SP247-201ENST00000411181 105 ntBASIC0.44□□□□□ -2.34
PCDHA9Q9Y5H5 MIR4473-201ENST00000583731 91 ntBASIC0.44□□□□□ -2.34
PCDHA9Q9Y5H5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-382P-201ENST00000365181 106 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 Y_RNA.371-201ENST00000365591 113 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 MIR501-201ENST00000390204 84 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 SNORD42B-201ENST00000458893 67 ntBASIC0.43□□□□□ -2.34
PCDHA9Q9Y5H5 RNA5SP62-201ENST00000363457 110 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 Y_RNA.313-201ENST00000365095 103 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 AC073261.1-201ENST00000429409 121 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 RNA5SP220-201ENST00000516298 104 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 MIR4773-1-201ENST00000637203 78 ntBASIC0.42□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-303P-201ENST00000517091 106 ntBASIC0.41□□□□□ -2.34
PCDHA9Q9Y5H5 MIR548AE1-201ENST00000583292 70 ntBASIC0.41□□□□□ -2.34
PCDHA9Q9Y5H5 MIR4712-201ENST00000583750 82 ntBASIC0.41□□□□□ -2.34
PCDHA9Q9Y5H5 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
PCDHA9Q9Y5H5 RNU6-1094P-201ENST00000362416 104 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-1124P-201ENST00000384169 107 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 SNORD78.1-201ENST00000390866 65 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-274P-201ENST00000459566 107 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 AC108740.1-201ENST00000498629 225 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 AC069113.3-201ENST00000521019 150 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 MIR6734-201ENST00000621166 68 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 MIR1297-201ENST00000637311 77 ntBASIC0.4□□□□□ -2.35
PCDHA9Q9Y5H5 MIR652-201ENST00000385278 98 ntBASIC0.39□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-752P-201ENST00000516376 102 ntBASIC0.39□□□□□ -2.35
PCDHA9Q9Y5H5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.39□□□□□ -2.35
PCDHA9Q9Y5H5 Y_RNA.94-201ENST00000363068 106 ntBASIC0.38□□□□□ -2.35
PCDHA9Q9Y5H5 RNU7-129P-201ENST00000516128 62 ntBASIC0.38□□□□□ -2.35
PCDHA9Q9Y5H5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.38□□□□□ -2.35
PCDHA9Q9Y5H5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
PCDHA9Q9Y5H5 MIR499B-201ENST00000636498 73 ntBASIC0.38□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-228P-201ENST00000362700 106 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-42P-201ENST00000384165 107 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-154P-201ENST00000384306 106 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 MIR516B1-201ENST00000385211 90 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 AC074348.1-201ENST00000426503 132 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-807P-201ENST00000516805 107 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 AC022709.1-201ENST00000615967 87 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
PCDHA9Q9Y5H5 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-782P-201ENST00000516852 104 ntBASIC0.36□□□□□ -2.35
PCDHA9Q9Y5H5 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.36□□□□□ -2.35
PCDHA9Q9Y5H5 RNU6-1039P-201ENST00000383931 107 ntBASIC0.35□□□□□ -2.35
PCDHA9Q9Y5H5 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
PCDHA9Q9Y5H5 AL691482.2-201ENST00000457453 84 ntBASIC0.35□□□□□ -2.35
PCDHA9Q9Y5H5 AC084368.1-201ENST00000620935 65 ntBASIC0.35□□□□□ -2.35
PCDHA9Q9Y5H5 SNORD114-29-201ENST00000364819 70 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 MIR1255A-201ENST00000408338 113 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 RNA5SP436-201ENST00000516020 115 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 Y_RNA.685-201ENST00000516532 108 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 MIR4711-201ENST00000578274 70 ntBASIC0.34□□□□□ -2.36
PCDHA9Q9Y5H5 MIR20A-201ENST00000362279 71 ntBASIC0.33□□□□□ -2.36
PCDHA9Q9Y5H5 Y_RNA.36-201ENST00000362602 112 ntBASIC0.33□□□□□ -2.36
PCDHA9Q9Y5H5 AC244090.1-201ENST00000441884 93 ntBASIC0.33□□□□□ -2.36
PCDHA9Q9Y5H5 MIR3925-201ENST00000584674 77 ntBASIC0.33□□□□□ -2.36
PCDHA9Q9Y5H5 RNU6-260P-201ENST00000384092 107 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 RNU6-279P-201ENST00000391297 101 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 MIR876-201ENST00000401147 81 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 MIR6509-201ENST00000614603 85 ntBASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
PCDHA9Q9Y5H5 Y_RNA.532-201ENST00000384590 113 ntBASIC0.31□□□□□ -2.36
PCDHA9Q9Y5H5 SNORA75.1-201ENST00000391130 148 ntBASIC0.31□□□□□ -2.36
PCDHA9Q9Y5H5 RNA5SP395-201ENST00000516567 118 ntBASIC0.3□□□□□ -2.36
PCDHA9Q9Y5H5 RNU7-188P-201ENST00000517063 64 ntBASIC0.29□□□□□ -2.36
PCDHA9Q9Y5H5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
PCDHA9Q9Y5H5 RNU6-24P-201ENST00000384440 107 ntBASIC0.28□□□□□ -2.36
PCDHA9Q9Y5H5 MIR7-2-201ENST00000384970 110 ntBASIC0.28□□□□□ -2.36
PCDHA9Q9Y5H5 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
PCDHA9Q9Y5H5 MIR892B-201ENST00000401279 77 ntBASIC0.27□□□□□ -2.37
PCDHA9Q9Y5H5 SNORD2-201ENST00000459163 69 ntBASIC0.27□□□□□ -2.37
PCDHA9Q9Y5H5 RNU6-857P-201ENST00000515893 110 ntBASIC0.27□□□□□ -2.37
PCDHA9Q9Y5H5 MIR3675-201ENST00000583661 73 ntBASIC0.27□□□□□ -2.37
PCDHA9Q9Y5H5 MIR6515-201ENST00000619843 57 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 371.5 ms