Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RNA5SP117-201ENST00000365294 118 ntBASIC1.41□□□□□ -2.18
LEMD3Q9Y2U8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
LEMD3Q9Y2U8 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
LEMD3Q9Y2U8 SNORA2.1-201ENST00000363089 137 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 SNORA25.5-201ENST00000363782 126 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 Y_RNA.236-201ENST00000364427 111 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 SNORD114-24-201ENST00000365029 72 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 MT-TY-201ENST00000387409 66 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 AC087343.1-201ENST00000477341 475 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 MIR4639-201ENST00000584938 69 ntBASIC1.4□□□□□ -2.19
LEMD3Q9Y2U8 SNORD114-27-201ENST00000363766 70 ntBASIC1.39□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-726P-201ENST00000364680 107 ntBASIC1.39□□□□□ -2.19
LEMD3Q9Y2U8 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
LEMD3Q9Y2U8 SCARNA21.1-201ENST00000515996 128 ntBASIC1.39□□□□□ -2.19
LEMD3Q9Y2U8 MIR466-201ENST00000580653 84 ntBASIC1.39□□□□□ -2.19
LEMD3Q9Y2U8 SNORD18A-201ENST00000363753 72 ntBASIC1.38□□□□□ -2.19
LEMD3Q9Y2U8 RNA5SP299-201ENST00000391203 116 ntBASIC1.38□□□□□ -2.19
LEMD3Q9Y2U8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.38□□□□□ -2.19
LEMD3Q9Y2U8 MIR6767-201ENST00000637302 66 ntBASIC1.38□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-446P-201ENST00000362827 106 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 RPS29P1-201ENST00000465274 159 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 MIR4460-201ENST00000577862 86 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 MIR6739-201ENST00000622461 75 ntBASIC1.37□□□□□ -2.19
LEMD3Q9Y2U8 RNU1-141P-201ENST00000364623 158 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-716P-201ENST00000365621 103 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 MIR598-201ENST00000384868 97 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 RNU7-74P-201ENST00000459104 62 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 U7.7-201ENST00000459276 60 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 RNU5B-6P-201ENST00000516765 68 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 RNA5SP47-201ENST00000517230 109 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 AC018659.1-201ENST00000551083 169 ntBASIC1.36□□□□□ -2.19
LEMD3Q9Y2U8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 SNORD105-201ENST00000386910 85 ntBASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-269P-201ENST00000391077 97 ntBASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-1089P-201ENST00000516473 104 ntBASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-135P-201ENST00000516769 101 ntBASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.35□□□□□ -2.19
LEMD3Q9Y2U8 MIR548L-201ENST00000408303 86 ntBASIC1.34□□□□□ -2.19
LEMD3Q9Y2U8 snoU13.13-201ENST00000458842 104 ntBASIC1.34□□□□□ -2.19
LEMD3Q9Y2U8 MIR3678-201ENST00000578455 94 ntBASIC1.34□□□□□ -2.19
LEMD3Q9Y2U8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
LEMD3Q9Y2U8 SNORA75.1-201ENST00000391130 148 ntBASIC1.33□□□□□ -2.2
LEMD3Q9Y2U8 RNU6-469P-201ENST00000516253 101 ntBASIC1.33□□□□□ -2.2
LEMD3Q9Y2U8 AC025627.3-201ENST00000582078 182 ntBASIC1.33□□□□□ -2.2
LEMD3Q9Y2U8 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
LEMD3Q9Y2U8 RNU6-940P-201ENST00000363433 104 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 RNA5SP215-201ENST00000363440 122 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 RNA5SP484-201ENST00000458857 111 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 MIR548V-201ENST00000584165 80 ntBASIC1.32□□□□□ -2.2
LEMD3Q9Y2U8 AL157398.1-201ENST00000452981 186 ntBASIC1.31□□□□□ -2.2
LEMD3Q9Y2U8 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
LEMD3Q9Y2U8 MIR3612-201ENST00000579753 87 ntBASIC1.3□□□□□ -2.2
LEMD3Q9Y2U8 SNORD113-4-201ENST00000364802 75 ntBASIC1.29□□□□□ -2.2
LEMD3Q9Y2U8 SNORA8.2-201ENST00000384372 139 ntBASIC1.29□□□□□ -2.2
LEMD3Q9Y2U8 MIR573-201ENST00000384964 99 ntBASIC1.29□□□□□ -2.2
LEMD3Q9Y2U8 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
LEMD3Q9Y2U8 MIR548J-201ENST00000408833 112 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 RNU6-122P-201ENST00000516818 107 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 RNU6-92P-201ENST00000605893 104 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 SNORD114-21-201ENST00000606412 72 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 MIR7978-201ENST00000636158 59 ntBASIC1.28□□□□□ -2.2
LEMD3Q9Y2U8 SNORD60.1-201ENST00000362451 73 ntBASIC1.27□□□□□ -2.21
LEMD3Q9Y2U8 MIR521-2-201ENST00000384818 87 ntBASIC1.27□□□□□ -2.21
LEMD3Q9Y2U8 MIR630-201ENST00000384957 97 ntBASIC1.27□□□□□ -2.21
LEMD3Q9Y2U8 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
LEMD3Q9Y2U8 AL162376.1-201ENST00000624117 175 ntBASIC1.27□□□□□ -2.21
LEMD3Q9Y2U8 MIR548C-201ENST00000384815 97 ntBASIC1.26□□□□□ -2.21
LEMD3Q9Y2U8 MIR3938-201ENST00000582157 103 ntBASIC1.26□□□□□ -2.21
LEMD3Q9Y2U8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 MIR373-201ENST00000362273 69 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 SNORD114-4-201ENST00000363962 75 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 RNU6-1162P-201ENST00000384443 104 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 Y_RNA.633-201ENST00000459107 95 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 MIR6828-201ENST00000636181 60 ntBASIC1.25□□□□□ -2.21
LEMD3Q9Y2U8 MIR652-201ENST00000385278 98 ntBASIC1.24□□□□□ -2.21
LEMD3Q9Y2U8 MIR548AE1-201ENST00000583292 70 ntBASIC1.24□□□□□ -2.21
LEMD3Q9Y2U8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.24□□□□□ -2.21
LEMD3Q9Y2U8 U2.7-201ENST00000619197 100 ntBASIC1.24□□□□□ -2.21
LEMD3Q9Y2U8 SNORA36.1-201ENST00000363424 132 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 RNU4-38P-201ENST00000364472 129 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 SNORA33.1-201ENST00000364957 130 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 AC021146.9-201ENST00000512503 156 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 RNU7-174P-201ENST00000516248 59 ntBASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.23□□□□□ -2.21
LEMD3Q9Y2U8 RNU6-302P-201ENST00000365249 107 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms