Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR889-201ENST00000401280 79 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 AC073261.1-201ENST00000429409 121 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-752P-201ENST00000516376 102 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR4711-201ENST00000578274 70 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR3134-201ENST00000579433 74 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR6835-201ENST00000621552 64 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 Y_RNA.371-201ENST00000365591 113 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 SNORA8.2-201ENST00000384372 139 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 SNORD75.2-201ENST00000408784 58 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 MIR4484-201ENST00000582855 83 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 AL162376.1-201ENST00000624117 175 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-495P-201ENST00000362995 107 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 Y_RNA.565-201ENST00000384719 101 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR1197-201ENST00000408818 88 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 HAR1A.1-201ENST00000459583 118 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
PTPN22Q9Y2R2 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-274P-201ENST00000459566 107 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP94-201ENST00000516917 108 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU1-141P-201ENST00000364623 158 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-382P-201ENST00000365181 106 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 SNORA8.1-201ENST00000384250 140 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-269P-201ENST00000391077 97 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-70P-201ENST00000516438 60 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-687P-201ENST00000516443 89 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 MIR3675-201ENST00000583661 73 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-587P-201ENST00000391282 106 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP227-201ENST00000516184 113 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP268-201ENST00000516828 124 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP347-201ENST00000362445 119 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-330P-201ENST00000363015 107 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-871P-201ENST00000516122 100 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-1015P-201ENST00000517121 99 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4460-201ENST00000577862 86 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 AC073869.9-201ENST00000641610 120 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-634P-201ENST00000459134 106 ntBASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 AC069503.3-201ENST00000618674 145 ntBASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 RNU6V-201ENST00000384105 107 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-54P-201ENST00000365563 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-35P-201ENST00000384530 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR2909-201ENST00000617113 69 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR664A-201ENST00000626086 82 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 RNA5SP484-201ENST00000458857 111 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-1039P-201ENST00000383931 107 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 AC139453.2-201ENST00000487255 133 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 MIR8053-201ENST00000613344 75 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 AL691482.2-201ENST00000457453 84 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 SNORD42B-201ENST00000458893 67 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 AC114801.3-201ENST00000510231 177 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 NAMPTP3-201ENST00000569273 224 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 SNORD114-4-201ENST00000363962 75 ntBASIC0.79□□□□□ -2.28
PTPN22Q9Y2R2 MIR154-201ENST00000385243 84 ntBASIC0.79□□□□□ -2.28
PTPN22Q9Y2R2 RNA5SP517-201ENST00000364724 117 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 AC098934.3-201ENST00000430450 190 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-539P-201ENST00000516665 103 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 MIR5706-201ENST00000579841 80 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 MIR6509-201ENST00000614603 85 ntBASIC0.77□□□□□ -2.29
PTPN22Q9Y2R2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 SNORD45.1-201ENST00000363181 77 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 SNORD115-22-201ENST00000364456 82 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 AC006210.1-201ENST00000424882 111 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-848P-201ENST00000515948 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-617P-201ENST00000516147 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-473P-201ENST00000516164 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 SNORD115-31-201ENST00000365318 82 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-260P-201ENST00000384092 107 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-540P-201ENST00000384622 101 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 390.8 ms