Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MIR3179-4-201ENST00000617599 84 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 MIR8068-201ENST00000618032 68 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 MIR548A1-201ENST00000385041 97 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 MIR517B-201ENST00000385102 67 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 MIR652-201ENST00000385278 98 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 U3.27-201ENST00000391237 200 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 AC145423.2-201ENST00000610631 239 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 SNORD45B-201ENST00000364617 72 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 MIR548A3-201ENST00000385297 97 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 SNORD22.1-201ENST00000516331 125 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 MIR4324-201ENST00000584846 72 ntBASIC-0.8□□□□□ -2.54
SHROOM4Q9ULL8 RNU6-935P-201ENST00000410371 100 ntBASIC-0.81□□□□□ -2.54
SHROOM4Q9ULL8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.81□□□□□ -2.54
SHROOM4Q9ULL8 RNA5SP461-201ENST00000516451 104 ntBASIC-0.81□□□□□ -2.54
SHROOM4Q9ULL8 MIR5704-201ENST00000584029 77 ntBASIC-0.81□□□□□ -2.54
SHROOM4Q9ULL8 MIR3914-2-201ENST00000637339 95 ntBASIC-0.81□□□□□ -2.54
SHROOM4Q9ULL8 AC244090.1-201ENST00000441884 93 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 AP000533.3-201ENST00000447704 118 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 MIR5009-201ENST00000578736 100 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 MIR548O2-201ENST00000616090 70 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 U6.95-201ENST00000636931 70 ntBASIC-0.82□□□□□ -2.54
SHROOM4Q9ULL8 RNU4-36P-201ENST00000364294 144 ntBASIC-0.83□□□□□ -2.54
SHROOM4Q9ULL8 SNORA49-201ENST00000386157 136 ntBASIC-0.83□□□□□ -2.54
SHROOM4Q9ULL8 SNORD64-201ENST00000386683 67 ntBASIC-0.83□□□□□ -2.54
SHROOM4Q9ULL8 MIR1285-2-201ENST00000408311 88 ntBASIC-0.83□□□□□ -2.54
SHROOM4Q9ULL8 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
SHROOM4Q9ULL8 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 SNORA13-201ENST00000458790 133 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 AC022137.1-201ENST00000483735 151 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 MIR3165-201ENST00000579874 75 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 MIR4441-201ENST00000582623 100 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 AL035470.1-201ENST00000622571 220 ntBASIC-0.84□□□□□ -2.54
SHROOM4Q9ULL8 RNU6-431P-201ENST00000383874 107 ntBASIC-0.85□□□□□ -2.55
SHROOM4Q9ULL8 AC025521.1-201ENST00000621624 286 ntBASIC-0.85□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 SNORD114-4-201ENST00000363962 75 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 SNORD50.2-201ENST00000365465 70 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 uc_338.19-201ENST00000616808 99 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-905P-201ENST00000384434 107 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-476P-201ENST00000384726 107 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
SHROOM4Q9ULL8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.88□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.88□□□□□ -2.55
SHROOM4Q9ULL8 SNORD2-201ENST00000459163 69 ntBASIC-0.88□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-158P-201ENST00000517104 100 ntBASIC-0.88□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.89□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.89□□□□□ -2.55
SHROOM4Q9ULL8 AC097510.1-201ENST00000510945 133 ntBASIC-0.89□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.89□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 SCARNA17-201ENST00000516183 144 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 AC140658.3-201ENST00000567603 271 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 AL513043.2-201ENST00000573941 143 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 MIR382-201ENST00000637119 76 ntBASIC-0.9□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 SNORD74.6-201ENST00000364796 70 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-274P-201ENST00000459566 107 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-75P-201ENST00000515944 104 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-659P-201ENST00000516454 104 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.91□□□□□ -2.55
SHROOM4Q9ULL8 MIR451A-201ENST00000385059 72 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 SNORD18.2-201ENST00000459604 70 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-813P-201ENST00000384691 107 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-412P-201ENST00000516434 106 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 MIR3613-201ENST00000579844 87 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.92□□□□□ -2.56
SHROOM4Q9ULL8 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.93□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.93□□□□□ -2.56
SHROOM4Q9ULL8 MIR147A-201ENST00000385079 72 ntBASIC-0.93□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-644P-201ENST00000391155 98 ntBASIC-0.93□□□□□ -2.56
SHROOM4Q9ULL8 SNORA40.17-201ENST00000517256 115 ntBASIC-0.93□□□□□ -2.56
SHROOM4Q9ULL8 MIR582-201ENST00000365731 98 ntBASIC-0.94□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-762P-201ENST00000517107 102 ntBASIC-0.94□□□□□ -2.56
SHROOM4Q9ULL8 MIR3668-201ENST00000582138 75 ntBASIC-0.94□□□□□ -2.56
SHROOM4Q9ULL8 RNY4P27-201ENST00000363341 96 ntBASIC-0.95□□□□□ -2.56
SHROOM4Q9ULL8 RNA5SP192-201ENST00000364404 120 ntBASIC-0.95□□□□□ -2.56
SHROOM4Q9ULL8 RNU6-209P-201ENST00000384118 107 ntBASIC-0.95□□□□□ -2.56
SHROOM4Q9ULL8 MIR124-2-201ENST00000385081 109 ntBASIC-0.95□□□□□ -2.56
SHROOM4Q9ULL8 SNORD114-17-201ENST00000364699 75 ntBASIC-0.96□□□□□ -2.56
SHROOM4Q9ULL8 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.98□□□□□ -2.57
SHROOM4Q9ULL8 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.98□□□□□ -2.57
SHROOM4Q9ULL8 MIR548E-201ENST00000408287 88 ntBASIC-0.98□□□□□ -2.57
SHROOM4Q9ULL8 SNORD33.1-201ENST00000516213 88 ntBASIC-0.98□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 314.6 ms