Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 U7.2-201ENST00000607576 63 ntBASIC-1.66□□□□□ -2.68
HPF1Q9NWY4 RNU6-832P-201ENST00000363319 107 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 RNU6-682P-201ENST00000363843 106 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 SNORD116-18-201ENST00000383961 92 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 MIR548A1-201ENST00000385041 97 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 SNORD75.2-201ENST00000408784 58 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 MIR3165-201ENST00000579874 75 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 MIR548Z-201ENST00000584743 97 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 MIR198-201ENST00000637333 62 ntBASIC-1.67□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.68□□□□□ -2.68
HPF1Q9NWY4 RNU7-120P-201ENST00000459334 63 ntBASIC-1.68□□□□□ -2.68
HPF1Q9NWY4 RNA5SP147-201ENST00000516493 109 ntBASIC-1.68□□□□□ -2.68
HPF1Q9NWY4 MIR548X2-201ENST00000579776 100 ntBASIC-1.68□□□□□ -2.68
HPF1Q9NWY4 AC090617.8-201ENST00000623339 167 ntBASIC-1.68□□□□□ -2.68
HPF1Q9NWY4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.69□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.69□□□□□ -2.68
HPF1Q9NWY4 SNORD58C-201ENST00000365223 64 ntBASIC-1.7□□□□□ -2.68
HPF1Q9NWY4 RNU7-24P-201ENST00000458867 62 ntBASIC-1.7□□□□□ -2.68
HPF1Q9NWY4 MIR378F-201ENST00000578143 78 ntBASIC-1.7□□□□□ -2.68
HPF1Q9NWY4 AC103810.7-201ENST00000607821 91 ntBASIC-1.7□□□□□ -2.68
HPF1Q9NWY4 RNY3P2-201ENST00000362918 102 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 RNU6-644P-201ENST00000391155 98 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 RNU6-327P-201ENST00000516270 127 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 AC006254.2-201ENST00000603259 279 ntBASIC-1.71□□□□□ -2.68
HPF1Q9NWY4 SNORD45B-201ENST00000364617 72 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 RNU6-260P-201ENST00000384092 107 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 SNORA24B-201ENST00000384176 131 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 MIR203A-201ENST00000384836 110 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 MIR4773-1-201ENST00000637203 78 ntBASIC-1.72□□□□□ -2.68
HPF1Q9NWY4 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR1468-201ENST00000410600 86 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MTND3P2-201ENST00000438452 342 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 SNORD4B-201ENST00000459083 72 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 RNA5SP470-201ENST00000516463 106 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR4464-201ENST00000580818 92 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR4503-201ENST00000582187 83 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR4439-201ENST00000583746 80 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 AL445584.3-201ENST00000617173 78 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 MIR6888-201ENST00000621977 67 ntBASIC-1.73□□□□□ -2.69
HPF1Q9NWY4 RNU6-382P-201ENST00000365181 106 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 RNU6-813P-201ENST00000384691 107 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 MIR601-201ENST00000385256 79 ntBASIC-1.74□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.75□□□□□ -2.69
HPF1Q9NWY4 RNU6-924P-201ENST00000362926 108 ntBASIC-1.75□□□□□ -2.69
HPF1Q9NWY4 snoU13.17-201ENST00000458802 104 ntBASIC-1.75□□□□□ -2.69
HPF1Q9NWY4 SNORA33.1-201ENST00000364957 130 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 RNU6-196P-201ENST00000384315 107 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 RNA5SP292-201ENST00000390974 118 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 MIR3613-201ENST00000579844 87 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 MIR6509-201ENST00000614603 85 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 AL035470.1-201ENST00000622571 220 ntBASIC-1.76□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.77□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.77□□□□□ -2.69
HPF1Q9NWY4 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.77□□□□□ -2.69
HPF1Q9NWY4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.77□□□□□ -2.69
HPF1Q9NWY4 MIR4306-201ENST00000583390 91 ntBASIC-1.77□□□□□ -2.69
HPF1Q9NWY4 SNORD90-201ENST00000391145 111 ntBASIC-1.78□□□□□ -2.69
HPF1Q9NWY4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 MIR548I1-201ENST00000408810 149 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 CYP3A54P-201ENST00000566950 75 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 MIR3115-201ENST00000577915 68 ntBASIC-1.79□□□□□ -2.7
HPF1Q9NWY4 RNU5F-1-201ENST00000362507 117 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 RNU6-394P-201ENST00000410735 107 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 AL691482.2-201ENST00000457453 84 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 RNA5SP272-201ENST00000516095 111 ntBASIC-1.8□□□□□ -2.7
HPF1Q9NWY4 RNU6-200P-201ENST00000364743 107 ntBASIC-1.81□□□□□ -2.7
HPF1Q9NWY4 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.81□□□□□ -2.7
HPF1Q9NWY4 RNU6-574P-201ENST00000384265 107 ntBASIC-1.81□□□□□ -2.7
HPF1Q9NWY4 MIR569-201ENST00000385228 96 ntBASIC-1.81□□□□□ -2.7
HPF1Q9NWY4 MIR4679-2-201ENST00000578358 77 ntBASIC-1.81□□□□□ -2.7
HPF1Q9NWY4 RNU6-804P-201ENST00000384286 107 ntBASIC-1.82□□□□□ -2.7
HPF1Q9NWY4 RNU4-61P-201ENST00000411243 107 ntBASIC-1.82□□□□□ -2.7
HPF1Q9NWY4 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.82□□□□□ -2.7
HPF1Q9NWY4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
HPF1Q9NWY4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.83□□□□□ -2.7
HPF1Q9NWY4 MIR3657-201ENST00000584818 117 ntBASIC-1.83□□□□□ -2.7
HPF1Q9NWY4 AL157777.2-201ENST00000258070 137 ntBASIC-1.84□□□□□ -2.7
HPF1Q9NWY4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.84□□□□□ -2.7
HPF1Q9NWY4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.84□□□□□ -2.7
HPF1Q9NWY4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.84□□□□□ -2.7
HPF1Q9NWY4 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.84□□□□□ -2.7
HPF1Q9NWY4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 229.8 ms