Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RNU2-59P-201ENST00000410482 191 ntBASIC0.63□□□□□ -2.31
HAPLN3Q96S86 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
HAPLN3Q96S86 RNU6-638P-201ENST00000516582 104 ntBASIC0.63□□□□□ -2.31
HAPLN3Q96S86 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
HAPLN3Q96S86 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
HAPLN3Q96S86 RNU6-340P-201ENST00000364005 107 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 Y_RNA.244-201ENST00000364484 109 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 RNU6V-201ENST00000384105 107 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 MIR216B-201ENST00000390186 82 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 NAMPTP3-201ENST00000569273 224 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 MIR4460-201ENST00000577862 86 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 U6.81-201ENST00000612550 106 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 SNORA70.25-201ENST00000612741 95 ntBASIC0.62□□□□□ -2.31
HAPLN3Q96S86 RNU6-495P-201ENST00000362995 107 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 RNU6-382P-201ENST00000365181 106 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 MIR518A1-201ENST00000385068 85 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 AC074348.1-201ENST00000426503 132 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 SNORD42B-201ENST00000458893 67 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 RNU5B-6P-201ENST00000516765 68 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 Y_RNA.788-201ENST00000622394 112 ntBASIC0.61□□□□□ -2.31
HAPLN3Q96S86 RNU6-1094P-201ENST00000362416 104 ntBASIC0.6□□□□□ -2.31
HAPLN3Q96S86 SCARNA18B-201ENST00000458806 135 ntBASIC0.6□□□□□ -2.31
HAPLN3Q96S86 MIR4484-201ENST00000582855 83 ntBASIC0.6□□□□□ -2.31
HAPLN3Q96S86 MIR924-201ENST00000638017 53 ntBASIC0.6□□□□□ -2.31
HAPLN3Q96S86 RNU6-330P-201ENST00000363015 107 ntBASIC0.59□□□□□ -2.31
HAPLN3Q96S86 RNU6-303P-201ENST00000517091 106 ntBASIC0.59□□□□□ -2.31
HAPLN3Q96S86 AC069503.3-201ENST00000618674 145 ntBASIC0.59□□□□□ -2.31
HAPLN3Q96S86 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
HAPLN3Q96S86 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 RNU6-1232P-201ENST00000516299 86 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 MIR4773-1-201ENST00000637203 78 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 AC073869.9-201ENST00000641610 120 ntBASIC0.58□□□□□ -2.32
HAPLN3Q96S86 RNU6-154P-201ENST00000384306 106 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 SNORD75.2-201ENST00000408784 58 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 RNU7-24P-201ENST00000458867 62 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
HAPLN3Q96S86 MIR6755-201ENST00000619993 66 ntBASIC0.57□□□□□ -2.32
HAPLN3Q96S86 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
HAPLN3Q96S86 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
HAPLN3Q96S86 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
HAPLN3Q96S86 RNA5SP457-201ENST00000363657 124 ntBASIC0.55□□□□□ -2.32
HAPLN3Q96S86 Y_RNA.374-201ENST00000365606 101 ntBASIC0.55□□□□□ -2.32
HAPLN3Q96S86 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
HAPLN3Q96S86 MIR548AE1-201ENST00000583292 70 ntBASIC0.55□□□□□ -2.32
HAPLN3Q96S86 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 MIR889-201ENST00000401280 79 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 RNU6-380P-201ENST00000410207 107 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 MIR3134-201ENST00000579433 74 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 AC145423.2-201ENST00000610631 239 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 MIR664A-201ENST00000626086 82 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 MIR1297-201ENST00000637311 77 ntBASIC0.54□□□□□ -2.32
HAPLN3Q96S86 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
HAPLN3Q96S86 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
HAPLN3Q96S86 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.53□□□□□ -2.32
HAPLN3Q96S86 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
HAPLN3Q96S86 RNU6-681P-201ENST00000364012 104 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
HAPLN3Q96S86 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 SNORA68.3-201ENST00000515906 83 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 RNU6-807P-201ENST00000516805 107 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 SNORA40.17-201ENST00000517256 115 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 MIR5706-201ENST00000579841 80 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 MIR4473-201ENST00000583731 91 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 U7.4-201ENST00000614961 63 ntBASIC0.52□□□□□ -2.33
HAPLN3Q96S86 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
HAPLN3Q96S86 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.51□□□□□ -2.33
HAPLN3Q96S86 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
HAPLN3Q96S86 RNU6-776P-201ENST00000364403 104 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 RNU6-1022P-201ENST00000365049 104 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 SNORA2A-201ENST00000383885 135 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 RNU6-1039P-201ENST00000383931 107 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 MIR652-201ENST00000385278 98 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 RNU6-274P-201ENST00000459566 107 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 RNU6-523P-201ENST00000516304 54 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
HAPLN3Q96S86 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 RNU6-990P-201ENST00000364385 104 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 Y_RNA.407-201ENST00000383986 113 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 MIR203A-201ENST00000384836 110 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 AL691482.2-201ENST00000457453 84 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 RNU6-848P-201ENST00000515948 107 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 RNU6-617P-201ENST00000516147 107 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 RNU6-473P-201ENST00000516164 107 ntBASIC0.49□□□□□ -2.33
HAPLN3Q96S86 RNU6-1049P-201ENST00000516414 107 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms