Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORA63.6-201ENST00000364921 119 ntBASIC1.88□□□□□ -2.11
TRIM47Q96LD4 MIR644A-201ENST00000385262 94 ntBASIC1.88□□□□□ -2.11
TRIM47Q96LD4 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
TRIM47Q96LD4 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
TRIM47Q96LD4 AC244669.1-204ENST00000621564 178 ntBASIC1.88□□□□□ -2.11
TRIM47Q96LD4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM47Q96LD4 MIR1-1-201ENST00000362147 71 ntBASIC1.87□□□□□ -2.11
TRIM47Q96LD4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRIM47Q96LD4 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
TRIM47Q96LD4 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
TRIM47Q96LD4 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
TRIM47Q96LD4 MIR6734-201ENST00000621166 68 ntBASIC1.87□□□□□ -2.11
TRIM47Q96LD4 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 AL591704.2-201ENST00000421658 181 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 RNA5SP102-201ENST00000516865 106 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 RNU1-92P-201ENST00000517017 135 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 AL512310.8-201ENST00000550183 120 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 MIR4639-201ENST00000584938 69 ntBASIC1.86□□□□□ -2.11
TRIM47Q96LD4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRIM47Q96LD4 RNU6-247P-201ENST00000362636 107 ntBASIC1.85□□□□□ -2.11
TRIM47Q96LD4 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
TRIM47Q96LD4 SNORD28-201ENST00000384706 75 ntBASIC1.85□□□□□ -2.11
TRIM47Q96LD4 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
TRIM47Q96LD4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM47Q96LD4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM47Q96LD4 Y_RNA.74-201ENST00000362911 99 ntBASIC1.84□□□□□ -2.11
TRIM47Q96LD4 RNU6-135P-201ENST00000516769 101 ntBASIC1.84□□□□□ -2.11
TRIM47Q96LD4 MIR4421-201ENST00000578133 69 ntBASIC1.84□□□□□ -2.11
TRIM47Q96LD4 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.11
TRIM47Q96LD4 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 RNU6-726P-201ENST00000364680 107 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 MIR517C-201ENST00000385103 95 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 MIR527-201ENST00000385244 85 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 CYP3A54P-201ENST00000566950 75 ntBASIC1.83□□□□□ -2.12
TRIM47Q96LD4 Y_RNA.282-201ENST00000364793 102 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNU6-716P-201ENST00000365621 103 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 MIR582-201ENST00000365731 98 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNU6-172P-201ENST00000411000 93 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 AL021921.1-201ENST00000442774 93 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNA5SP484-201ENST00000458857 111 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 AC002350.1-201ENST00000490759 375 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNU6-518P-201ENST00000516056 96 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 SCARNA17.3-201ENST00000516381 125 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNA5SP480-201ENST00000516840 109 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RN7SKP88-201ENST00000516847 250 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.82□□□□□ -2.12
TRIM47Q96LD4 7SK.8-201ENST00000612110 250 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 7SK.13-201ENST00000622040 250 ntBASIC1.82□□□□□ -2.12
TRIM47Q96LD4 RNU6-269P-201ENST00000391077 97 ntBASIC1.81□□□□□ -2.12
TRIM47Q96LD4 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
TRIM47Q96LD4 SNORD1B-201ENST00000363091 84 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 SNORD114-22-201ENST00000365423 72 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 SNORA8.2-201ENST00000384372 139 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 MIR652-201ENST00000385278 98 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 MIR1827-201ENST00000408549 66 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 RNU7-90P-201ENST00000459216 62 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 RNU6-469P-201ENST00000516253 101 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 RNU6-419P-201ENST00000517030 63 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 MIR4490-201ENST00000582647 84 ntBASIC1.8□□□□□ -2.12
TRIM47Q96LD4 RNU6-986P-201ENST00000363133 102 ntBASIC1.79□□□□□ -2.12
TRIM47Q96LD4 SNORA80D-201ENST00000384488 135 ntBASIC1.79□□□□□ -2.12
TRIM47Q96LD4 MIR548E-201ENST00000408287 88 ntBASIC1.79□□□□□ -2.12
TRIM47Q96LD4 SNORA31.24-201ENST00000517232 57 ntBASIC1.79□□□□□ -2.12
TRIM47Q96LD4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM47Q96LD4 RNU6-246P-201ENST00000384702 107 ntBASIC1.78□□□□□ -2.12
TRIM47Q96LD4 AL353770.2-201ENST00000620024 78 ntBASIC1.78□□□□□ -2.12
TRIM47Q96LD4 U6.96-201ENST00000636425 70 ntBASIC1.78□□□□□ -2.12
TRIM47Q96LD4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
TRIM47Q96LD4 Y_RNA.407-201ENST00000383986 113 ntBASIC1.77□□□□□ -2.13
TRIM47Q96LD4 RNU6-910P-201ENST00000390844 107 ntBASIC1.77□□□□□ -2.13
TRIM47Q96LD4 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
TRIM47Q96LD4 RNA5SP47-201ENST00000517230 109 ntBASIC1.76□□□□□ -2.13
TRIM47Q96LD4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM47Q96LD4 AC090617.8-201ENST00000623339 167 ntBASIC1.76□□□□□ -2.13
TRIM47Q96LD4 RNU6-924P-201ENST00000362926 108 ntBASIC1.75□□□□□ -2.13
TRIM47Q96LD4 SNORD18A-201ENST00000363753 72 ntBASIC1.75□□□□□ -2.13
TRIM47Q96LD4 MIR548AE1-201ENST00000583292 70 ntBASIC1.75□□□□□ -2.13
TRIM47Q96LD4 SNORD79.1-201ENST00000516069 84 ntBASIC1.74□□□□□ -2.13
TRIM47Q96LD4 MIR6078-201ENST00000611069 100 ntBASIC1.74□□□□□ -2.13
TRIM47Q96LD4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM47Q96LD4 MIR519A2-201ENST00000384990 87 ntBASIC1.73□□□□□ -2.13
TRIM47Q96LD4 MIR96-201ENST00000362288 78 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 MIR516B1-201ENST00000385211 90 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 MIR1255B2-201ENST00000408618 67 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 MIR548AG1-201ENST00000579932 66 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 MIR4473-201ENST00000583731 91 ntBASIC1.72□□□□□ -2.13
TRIM47Q96LD4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM47Q96LD4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM47Q96LD4 Y_RNA.109-201ENST00000363215 102 ntBASIC1.71□□□□□ -2.14
TRIM47Q96LD4 SNORD114-26-201ENST00000363543 72 ntBASIC1.7□□□□□ -2.14
TRIM47Q96LD4 RNU6-696P-201ENST00000390834 107 ntBASIC1.7□□□□□ -2.14
TRIM47Q96LD4 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
TRIM47Q96LD4 AL162376.1-201ENST00000624117 175 ntBASIC1.7□□□□□ -2.14
TRIM47Q96LD4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM47Q96LD4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM47Q96LD4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 566.8 ms