Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MIR5706-201ENST00000579841 80 ntBASIC0.69□□□□□ -2.3
SH3RF2Q8TEC5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SH3RF2Q8TEC5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
SH3RF2Q8TEC5 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
SH3RF2Q8TEC5 RNU6-303P-201ENST00000517091 106 ntBASIC0.68□□□□□ -2.3
SH3RF2Q8TEC5 Y_RNA.371-201ENST00000365591 113 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 RNU6V-201ENST00000384105 107 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 SNORD110-201ENST00000408189 75 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 RNU7-24P-201ENST00000458867 62 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 RNU6-857P-201ENST00000515893 110 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 U7.6-201ENST00000610841 64 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 U6.81-201ENST00000612550 106 ntBASIC0.67□□□□□ -2.3
SH3RF2Q8TEC5 RNU6-340P-201ENST00000364005 107 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 SNORD75.2-201ENST00000408784 58 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 RNA5SP395-201ENST00000516567 118 ntBASIC0.66□□□□□ -2.3
SH3RF2Q8TEC5 SNORD114-4-201ENST00000363962 75 ntBASIC0.65□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-274P-201ENST00000459566 107 ntBASIC0.65□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-495P-201ENST00000362995 107 ntBASIC0.64□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-824P-201ENST00000363724 104 ntBASIC0.64□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP325-201ENST00000363756 130 ntBASIC0.64□□□□□ -2.31
SH3RF2Q8TEC5 SNORA2A-201ENST00000383885 135 ntBASIC0.64□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP225-201ENST00000410874 135 ntBASIC0.64□□□□□ -2.31
SH3RF2Q8TEC5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SH3RF2Q8TEC5 MIR4773-1-201ENST00000637203 78 ntBASIC0.63□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-382P-201ENST00000365181 106 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-54P-201ENST00000365563 107 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-752P-201ENST00000516376 102 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-638P-201ENST00000516582 104 ntBASIC0.62□□□□□ -2.31
SH3RF2Q8TEC5 AC074348.1-201ENST00000426503 132 ntBASIC0.61□□□□□ -2.31
SH3RF2Q8TEC5 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
SH3RF2Q8TEC5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.61□□□□□ -2.31
SH3RF2Q8TEC5 MIR4752-201ENST00000579672 72 ntBASIC0.61□□□□□ -2.31
SH3RF2Q8TEC5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.6□□□□□ -2.31
SH3RF2Q8TEC5 MIR193B-201ENST00000384907 83 ntBASIC0.6□□□□□ -2.31
SH3RF2Q8TEC5 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
SH3RF2Q8TEC5 SNORA70.25-201ENST00000612741 95 ntBASIC0.6□□□□□ -2.31
SH3RF2Q8TEC5 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 U7.4-201ENST00000614961 63 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.31
SH3RF2Q8TEC5 MIR1273G-201ENST00000577677 100 ntBASIC0.58□□□□□ -2.32
SH3RF2Q8TEC5 RNU1-29P-201ENST00000606574 126 ntBASIC0.58□□□□□ -2.32
SH3RF2Q8TEC5 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.58□□□□□ -2.32
SH3RF2Q8TEC5 uc_338.10-201ENST00000621872 182 ntBASIC0.58□□□□□ -2.32
SH3RF2Q8TEC5 AL691482.2-201ENST00000457453 84 ntBASIC0.57□□□□□ -2.32
SH3RF2Q8TEC5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
SH3RF2Q8TEC5 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
SH3RF2Q8TEC5 MIR4662A-201ENST00000637499 67 ntBASIC0.57□□□□□ -2.32
SH3RF2Q8TEC5 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
SH3RF2Q8TEC5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.56□□□□□ -2.32
SH3RF2Q8TEC5 AC145423.2-201ENST00000610631 239 ntBASIC0.56□□□□□ -2.32
SH3RF2Q8TEC5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SH3RF2Q8TEC5 Y_RNA.244-201ENST00000364484 109 ntBASIC0.55□□□□□ -2.32
SH3RF2Q8TEC5 RNU6-154P-201ENST00000384306 106 ntBASIC0.55□□□□□ -2.32
SH3RF2Q8TEC5 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
SH3RF2Q8TEC5 MIR4473-201ENST00000583731 91 ntBASIC0.55□□□□□ -2.32
SH3RF2Q8TEC5 RNU6-1039P-201ENST00000383931 107 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 SNORA8.1-201ENST00000384250 140 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 Y_RNA.532-201ENST00000384590 113 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 SNORD42B-201ENST00000458893 67 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 Y_RNA.681-201ENST00000516445 113 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 MIR4484-201ENST00000582855 83 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 MIR3675-201ENST00000583661 73 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
SH3RF2Q8TEC5 MIR760-201ENST00000390220 80 ntBASIC0.53□□□□□ -2.32
SH3RF2Q8TEC5 HMGN2P22-201ENST00000427588 175 ntBASIC0.53□□□□□ -2.32
SH3RF2Q8TEC5 MIR6509-201ENST00000614603 85 ntBASIC0.53□□□□□ -2.32
SH3RF2Q8TEC5 SNORA68.3-201ENST00000515906 83 ntBASIC0.52□□□□□ -2.33
SH3RF2Q8TEC5 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
SH3RF2Q8TEC5 MIR924-201ENST00000638017 53 ntBASIC0.52□□□□□ -2.33
SH3RF2Q8TEC5 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
SH3RF2Q8TEC5 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
SH3RF2Q8TEC5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
SH3RF2Q8TEC5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.51□□□□□ -2.33
SH3RF2Q8TEC5 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
SH3RF2Q8TEC5 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
SH3RF2Q8TEC5 SCARNA18B-201ENST00000458806 135 ntBASIC0.5□□□□□ -2.33
SH3RF2Q8TEC5 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SH3RF2Q8TEC5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
SH3RF2Q8TEC5 SNORA9.1-201ENST00000362412 131 ntBASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 RNA5SP457-201ENST00000363657 124 ntBASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 RNU6-260P-201ENST00000384092 107 ntBASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 MIR652-201ENST00000385278 98 ntBASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.49□□□□□ -2.33
SH3RF2Q8TEC5 MIR548AE1-201ENST00000583292 70 ntBASIC0.48□□□□□ -2.33
SH3RF2Q8TEC5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 MIR20A-201ENST00000362279 71 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 268.1 ms