Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU7-24P-201ENST00000458867 62 ntBASIC-0.86□□□□□ -2.55
LMX1AQ8TE12 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.86□□□□□ -2.55
LMX1AQ8TE12 AC072026.1-201ENST00000605023 201 ntBASIC-0.86□□□□□ -2.55
LMX1AQ8TE12 AC103810.7-201ENST00000607821 91 ntBASIC-0.86□□□□□ -2.55
LMX1AQ8TE12 AC062037.2-201ENST00000610137 73 ntBASIC-0.86□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 RNU6-479P-201ENST00000516348 105 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 RNU6-861P-201ENST00000516745 106 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 MIR4777-201ENST00000583710 86 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 MIR3657-201ENST00000584818 117 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.87□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 SNORD58C-201ENST00000365223 64 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 SNORA62.4-201ENST00000365504 151 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 MIR889-201ENST00000401280 79 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 AL118496.2-201ENST00000448300 230 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 snoU83B.1-201ENST00000517136 88 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 MIR4694-201ENST00000578534 80 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 MIR4306-201ENST00000583390 91 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 MIR6818-201ENST00000621576 65 ntBASIC-0.88□□□□□ -2.55
LMX1AQ8TE12 SNORA20.1-201ENST00000364790 130 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 SNORA18.5-201ENST00000516616 101 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 CYP3A54P-201ENST00000566950 75 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
LMX1AQ8TE12 RNU6-774P-201ENST00000363238 107 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 RNU6-260P-201ENST00000384092 107 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 RNU6-24P-201ENST00000384440 107 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 MIR519A2-201ENST00000384990 87 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 MIR569-201ENST00000385228 96 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 SNORA26.4-201ENST00000391188 123 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 MTND3P2-201ENST00000438452 342 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 RNU6-795P-201ENST00000516323 103 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 AC025166.1-201ENST00000612411 163 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 AC012531.4-201ENST00000616509 177 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 AP001340.1-201ENST00000624405 217 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 MIR4773-1-201ENST00000637203 78 ntBASIC-0.9□□□□□ -2.55
LMX1AQ8TE12 RNY3P2-201ENST00000362918 102 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 RNU4-32P-201ENST00000363404 141 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 RNU6-246P-201ENST00000384702 107 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 SNORD19-201ENST00000391191 68 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 SNORA19.1-201ENST00000410656 129 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 MIR3115-201ENST00000577915 68 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.91□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 RNU6-574P-201ENST00000384265 107 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 MIR29B1-201ENST00000385015 81 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 MIR548I1-201ENST00000408810 149 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 AC026421.1-201ENST00000519101 163 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 MIR6509-201ENST00000614603 85 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 MIR6874-201ENST00000635894 71 ntBASIC-0.92□□□□□ -2.56
LMX1AQ8TE12 RNY4P6-201ENST00000363667 96 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 SNORD116-18-201ENST00000383961 92 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 RNU6-10P-201ENST00000384036 107 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 RNU6-804P-201ENST00000384286 107 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 RNU6-644P-201ENST00000391155 98 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 MTND5P41-201ENST00000517498 206 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 U6.81-201ENST00000612550 106 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 AC091912.2-201ENST00000624798 167 ntBASIC-0.93□□□□□ -2.56
LMX1AQ8TE12 SNORA2.1-201ENST00000363089 137 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 RNU6-813P-201ENST00000384691 107 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 MIR548U-201ENST00000390728 81 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 MIR1302-3-201ENST00000408128 138 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 RNU7-107P-201ENST00000459121 61 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 RNU6-772P-201ENST00000516042 105 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 RNU6-62P-201ENST00000516526 102 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 AC132825.6-201ENST00000638861 357 ntBASIC-0.94□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 RNU6-394P-201ENST00000410735 107 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 RPL35AP4-201ENST00000412007 102 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 RNU7-88P-201ENST00000458752 63 ntBASIC-0.95□□□□□ -2.56
LMX1AQ8TE12 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.96□□□□□ -2.56
LMX1AQ8TE12 SNORD115-33-201ENST00000363723 82 ntBASIC-0.96□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.96□□□□□ -2.56
LMX1AQ8TE12 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 1251.1 ms