Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 U2.7-201ENST00000619197 100 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATG4DQ86TL0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 SNORA33.1-201ENST00000364957 130 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 MIR517B-201ENST00000385102 67 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 RNU6-808P-201ENST00000391233 108 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
ATG4DQ86TL0 RNU6-1184P-201ENST00000384588 108 ntBASIC1.23□□□□□ -2.21
ATG4DQ86TL0 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
ATG4DQ86TL0 U7.7-201ENST00000459276 60 ntBASIC1.23□□□□□ -2.21
ATG4DQ86TL0 RNU7-174P-201ENST00000516248 59 ntBASIC1.23□□□□□ -2.21
ATG4DQ86TL0 U4.4-201ENST00000620626 117 ntBASIC1.23□□□□□ -2.21
ATG4DQ86TL0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 MIR573-201ENST00000384964 99 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 MIR652-201ENST00000385278 98 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
ATG4DQ86TL0 RNU6-698P-201ENST00000363523 107 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 RNU6-34P-201ENST00000364874 107 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 SNORD113-2-201ENST00000391082 72 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.21□□□□□ -2.22
ATG4DQ86TL0 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 MIR548AE1-201ENST00000583292 70 ntBASIC1.21□□□□□ -2.22
ATG4DQ86TL0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.21□□□□□ -2.22
ATG4DQ86TL0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
ATG4DQ86TL0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ATG4DQ86TL0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 MIR582-201ENST00000365731 98 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 MIR4473-201ENST00000583731 91 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 MIR548AD-201ENST00000584780 82 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 MIR8070-201ENST00000616510 88 ntBASIC1.2□□□□□ -2.22
ATG4DQ86TL0 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
ATG4DQ86TL0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ATG4DQ86TL0 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
ATG4DQ86TL0 AL162376.1-201ENST00000624117 175 ntBASIC1.19□□□□□ -2.22
ATG4DQ86TL0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
ATG4DQ86TL0 RNA5SP227-201ENST00000516184 113 ntBASIC1.18□□□□□ -2.22
ATG4DQ86TL0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.18□□□□□ -2.22
ATG4DQ86TL0 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
ATG4DQ86TL0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 SNORA63.6-201ENST00000364921 119 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 uc_338.10-201ENST00000621872 182 ntBASIC1.17□□□□□ -2.22
ATG4DQ86TL0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
ATG4DQ86TL0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.16□□□□□ -2.22
ATG4DQ86TL0 SNORA41B-201ENST00000384785 128 ntBASIC1.16□□□□□ -2.22
ATG4DQ86TL0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.16□□□□□ -2.22
ATG4DQ86TL0 MIR548E-201ENST00000408287 88 ntBASIC1.16□□□□□ -2.22
ATG4DQ86TL0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.16□□□□□ -2.22
ATG4DQ86TL0 SNORA9.1-201ENST00000362412 131 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 SNORA36.1-201ENST00000363424 132 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 AC006210.1-201ENST00000424882 111 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 MIR6828-201ENST00000636181 60 ntBASIC1.15□□□□□ -2.23
ATG4DQ86TL0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
ATG4DQ86TL0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.14□□□□□ -2.23
ATG4DQ86TL0 SNORD110-201ENST00000408189 75 ntBASIC1.14□□□□□ -2.23
ATG4DQ86TL0 RNU4-88P-201ENST00000411220 86 ntBASIC1.14□□□□□ -2.23
ATG4DQ86TL0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
ATG4DQ86TL0 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
ATG4DQ86TL0 AC011195.1-201ENST00000578177 177 ntBASIC1.13□□□□□ -2.23
ATG4DQ86TL0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.13□□□□□ -2.23
ATG4DQ86TL0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ATG4DQ86TL0 MIR18A-201ENST00000362310 71 ntBASIC1.12□□□□□ -2.23
ATG4DQ86TL0 RNA5SP268-201ENST00000516828 124 ntBASIC1.12□□□□□ -2.23
ATG4DQ86TL0 CYP3A54P-201ENST00000566950 75 ntBASIC1.12□□□□□ -2.23
ATG4DQ86TL0 MIR4752-201ENST00000579672 72 ntBASIC1.12□□□□□ -2.23
ATG4DQ86TL0 AC090617.8-201ENST00000623339 167 ntBASIC1.12□□□□□ -2.23
ATG4DQ86TL0 MIR1287-201ENST00000408492 90 ntBASIC1.11□□□□□ -2.23
ATG4DQ86TL0 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
ATG4DQ86TL0 MIR7107-201ENST00000611489 80 ntBASIC1.11□□□□□ -2.23
ATG4DQ86TL0 SNORA70.25-201ENST00000612741 95 ntBASIC1.11□□□□□ -2.23
ATG4DQ86TL0 U6.96-201ENST00000636425 70 ntBASIC1.11□□□□□ -2.23
ATG4DQ86TL0 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
ATG4DQ86TL0 RNU6-520P-201ENST00000384717 104 ntBASIC1.1□□□□□ -2.23
ATG4DQ86TL0 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
ATG4DQ86TL0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
ATG4DQ86TL0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.1□□□□□ -2.23
ATG4DQ86TL0 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
ATG4DQ86TL0 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
ATG4DQ86TL0 MIR516B1-201ENST00000385211 90 ntBASIC1.09□□□□□ -2.23
ATG4DQ86TL0 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
ATG4DQ86TL0 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
ATG4DQ86TL0 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 Y_RNA.379-201ENST00000365653 102 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNU6-518P-201ENST00000516056 96 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNA5SP94-201ENST00000516917 108 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms