Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MIR4473-201ENST00000583731 91 ntBASIC0.21□□□□□ -2.38
SNAI3Q3KNW1 uc_338.10-201ENST00000621872 182 ntBASIC0.21□□□□□ -2.38
SNAI3Q3KNW1 RNU6-824P-201ENST00000363724 104 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 RNU6-42P-201ENST00000384165 107 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 SNORD77.2-201ENST00000391045 68 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 AL450471.1-201ENST00000447509 127 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 RNU7-24P-201ENST00000458867 62 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 SNORD42B-201ENST00000458893 67 ntBASIC0.2□□□□□ -2.38
SNAI3Q3KNW1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU6-208P-201ENST00000362431 107 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 Y_RNA.264-201ENST00000364665 102 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU6-1276P-201ENST00000365372 104 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU6-242P-201ENST00000384359 107 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 MIR1302-4-201ENST00000408701 150 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 SNORD75.2-201ENST00000408784 58 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 Y_RNA.606-201ENST00000410579 103 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNY4P29-201ENST00000410801 97 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU6-592P-201ENST00000411333 103 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 Y_RNA.660-201ENST00000516002 120 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
SNAI3Q3KNW1 RNU6-161P-201ENST00000363051 106 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 RNU6-382P-201ENST00000365181 106 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 Y_RNA.388-201ENST00000383919 113 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 MIR516B1-201ENST00000385211 90 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 MIR652-201ENST00000385278 98 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 SNORA26.2-201ENST00000390922 122 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 RNU6-1108P-201ENST00000516308 104 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 RNU6-782P-201ENST00000516852 104 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 U6.81-201ENST00000612550 106 ntBASIC0.18□□□□□ -2.38
SNAI3Q3KNW1 RNU6-478P-201ENST00000363904 110 ntBASIC0.17□□□□□ -2.38
SNAI3Q3KNW1 SNORD114-4-201ENST00000363962 75 ntBASIC0.17□□□□□ -2.38
SNAI3Q3KNW1 RNU6-652P-201ENST00000365488 107 ntBASIC0.17□□□□□ -2.38
SNAI3Q3KNW1 RNU6-129P-201ENST00000391022 107 ntBASIC0.17□□□□□ -2.38
SNAI3Q3KNW1 MIR4666B-201ENST00000578142 81 ntBASIC0.17□□□□□ -2.38
SNAI3Q3KNW1 RNU6-340P-201ENST00000364005 107 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 RNU6-686P-201ENST00000364839 107 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 Y_RNA.316-201ENST00000365118 111 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 RNU6-154P-201ENST00000384306 106 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 YWHAEP3-201ENST00000582767 121 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
SNAI3Q3KNW1 MIRLET7A1-201ENST00000362295 80 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 RNU6-787P-201ENST00000384032 107 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 MIR876-201ENST00000401147 81 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 MIR6515-201ENST00000619843 57 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 MIR4773-1-201ENST00000637203 78 ntBASIC0.15□□□□□ -2.39
SNAI3Q3KNW1 Y_RNA.12-201ENST00000362393 112 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 SNORA42.1-201ENST00000363515 137 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 Y_RNA.371-201ENST00000365591 113 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 RNU6-573P-201ENST00000383938 106 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 MIR548H2-201ENST00000408874 88 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.14□□□□□ -2.39
SNAI3Q3KNW1 RNU6-315P-201ENST00000362666 107 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 RNU6-681P-201ENST00000364012 104 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 SNORD114-29-201ENST00000364819 70 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 RNA5SP173-201ENST00000364857 136 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 AC244090.1-201ENST00000441884 93 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 RNU7-188P-201ENST00000517063 64 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 MIR1245B-201ENST00000636115 69 ntBASIC0.13□□□□□ -2.39
SNAI3Q3KNW1 MIR20A-201ENST00000362279 71 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 RNU6-1039P-201ENST00000383931 107 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 SNORA75.1-201ENST00000391130 148 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 RNU6-175P-201ENST00000516896 107 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 RN7SL660P-201ENST00000614852 299 ntBASIC0.12□□□□□ -2.39
SNAI3Q3KNW1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 Y_RNA.313-201ENST00000365095 103 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 AC074348.1-201ENST00000426503 132 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 RNU6-274P-201ENST00000459566 107 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 RNU6-303P-201ENST00000517091 106 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 MIR4743-201ENST00000584576 69 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
SNAI3Q3KNW1 Y_RNA.94-201ENST00000363068 106 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 SNORD114-23-201ENST00000363536 72 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 RNA5SP325-201ENST00000363756 130 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 MIR582-201ENST00000365731 98 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 RNU6-260P-201ENST00000384092 107 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 Y_RNA.532-201ENST00000384590 113 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 MIR548E-201ENST00000408287 88 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 AL691482.2-201ENST00000457453 84 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 RNU6-752P-201ENST00000516376 102 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
SNAI3Q3KNW1 RNU6-990P-201ENST00000364385 104 ntBASIC0.09□□□□□ -2.4
SNAI3Q3KNW1 RNU6-180P-201ENST00000516697 61 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms