Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
YBX1P67809 MIR1265-201ENST00000408444 86 ntBASIC1.11□□□□□ -2.23
YBX1P67809 AC005520.4-201ENST00000604337 90 ntBASIC1.11□□□□□ -2.23
YBX1P67809 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
YBX1P67809 Y_RNA.443-201ENST00000384135 111 ntBASIC1.09□□□□□ -2.23
YBX1P67809 MT-TY-201ENST00000387409 66 ntBASIC1.09□□□□□ -2.23
YBX1P67809 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
YBX1P67809 AC093423.1-201ENST00000440817 142 ntBASIC1.09□□□□□ -2.23
YBX1P67809 SNORD42B-201ENST00000458893 67 ntBASIC1.09□□□□□ -2.23
YBX1P67809 RNA5SP255-201ENST00000516370 107 ntBASIC1.09□□□□□ -2.23
YBX1P67809 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
YBX1P67809 AC011195.1-201ENST00000578177 177 ntBASIC1.09□□□□□ -2.23
YBX1P67809 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
YBX1P67809 SNORA25.4-201ENST00000363666 124 ntBASIC1.08□□□□□ -2.24
YBX1P67809 SNORD114-27-201ENST00000363766 70 ntBASIC1.08□□□□□ -2.24
YBX1P67809 RNU1-141P-201ENST00000364623 158 ntBASIC1.08□□□□□ -2.24
YBX1P67809 MIR216A-201ENST00000385063 110 ntBASIC1.08□□□□□ -2.24
YBX1P67809 RNU6-269P-201ENST00000391077 97 ntBASIC1.08□□□□□ -2.24
YBX1P67809 SNORD99-201ENST00000408612 74 ntBASIC1.08□□□□□ -2.24
YBX1P67809 RNU6-982P-201ENST00000516216 102 ntBASIC1.08□□□□□ -2.24
YBX1P67809 RNU6-260P-201ENST00000384092 107 ntBASIC1.07□□□□□ -2.24
YBX1P67809 SNORD116-24-201ENST00000384549 92 ntBASIC1.07□□□□□ -2.24
YBX1P67809 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.07□□□□□ -2.24
YBX1P67809 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
YBX1P67809 RNA5SP457-201ENST00000363657 124 ntBASIC1.06□□□□□ -2.24
YBX1P67809 RNU6-471P-201ENST00000383944 106 ntBASIC1.06□□□□□ -2.24
YBX1P67809 RNA5SP227-201ENST00000516184 113 ntBASIC1.06□□□□□ -2.24
YBX1P67809 RNU5B-6P-201ENST00000516765 68 ntBASIC1.06□□□□□ -2.24
YBX1P67809 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
YBX1P67809 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.06□□□□□ -2.24
YBX1P67809 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
YBX1P67809 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
YBX1P67809 SNORA8.2-201ENST00000384372 139 ntBASIC1.05□□□□□ -2.24
YBX1P67809 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
YBX1P67809 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
YBX1P67809 Y_RNA.68-201ENST00000362881 102 ntBASIC1.04□□□□□ -2.24
YBX1P67809 MTND4LP1-201ENST00000446263 157 ntBASIC1.04□□□□□ -2.24
YBX1P67809 RNA5SP484-201ENST00000458857 111 ntBASIC1.04□□□□□ -2.24
YBX1P67809 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
YBX1P67809 RNA5SP147-201ENST00000516493 109 ntBASIC1.03□□□□□ -2.24
YBX1P67809 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
YBX1P67809 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
YBX1P67809 AC073869.9-201ENST00000641610 120 ntBASIC1.03□□□□□ -2.24
YBX1P67809 RNU6-668P-201ENST00000364180 107 ntBASIC1.02□□□□□ -2.25
YBX1P67809 RNU6-990P-201ENST00000364385 104 ntBASIC1.02□□□□□ -2.25
YBX1P67809 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
YBX1P67809 RNA5SP436-201ENST00000516020 115 ntBASIC1.02□□□□□ -2.25
YBX1P67809 MIR6828-201ENST00000636181 60 ntBASIC1.02□□□□□ -2.25
YBX1P67809 SNORD114-4-201ENST00000363962 75 ntBASIC1.01□□□□□ -2.25
YBX1P67809 Y_RNA.433-201ENST00000384089 102 ntBASIC1.01□□□□□ -2.25
YBX1P67809 RNA5SP268-201ENST00000516828 124 ntBASIC1.01□□□□□ -2.25
YBX1P67809 AC018659.1-201ENST00000551083 169 ntBASIC1.01□□□□□ -2.25
YBX1P67809 AC069503.3-201ENST00000618674 145 ntBASIC1.01□□□□□ -2.25
YBX1P67809 AL109933.3-201ENST00000619095 188 ntBASIC1.01□□□□□ -2.25
YBX1P67809 AL162376.1-201ENST00000624117 175 ntBASIC1.01□□□□□ -2.25
YBX1P67809 SNORA36.1-201ENST00000363424 132 ntBASIC1□□□□□ -2.25
YBX1P67809 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
YBX1P67809 MIR193B-201ENST00000384907 83 ntBASIC1□□□□□ -2.25
YBX1P67809 MIR1273G-201ENST00000577677 100 ntBASIC1□□□□□ -2.25
YBX1P67809 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1□□□□□ -2.25
YBX1P67809 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1□□□□□ -2.25
YBX1P67809 SNORA2.1-201ENST00000363089 137 ntBASIC0.99□□□□□ -2.25
YBX1P67809 RNU6-645P-201ENST00000364649 106 ntBASIC0.99□□□□□ -2.25
YBX1P67809 MIR9-2-201ENST00000384838 87 ntBASIC0.99□□□□□ -2.25
YBX1P67809 RNA5SP94-201ENST00000516917 108 ntBASIC0.99□□□□□ -2.25
YBX1P67809 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
YBX1P67809 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
YBX1P67809 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
YBX1P67809 AC006210.1-201ENST00000424882 111 ntBASIC0.97□□□□□ -2.25
YBX1P67809 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
YBX1P67809 MIR4511-201ENST00000582784 87 ntBASIC0.97□□□□□ -2.25
YBX1P67809 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
YBX1P67809 AC103706.3-201ENST00000636297 85 ntBASIC0.97□□□□□ -2.25
YBX1P67809 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
YBX1P67809 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
YBX1P67809 SNORA40.17-201ENST00000517256 115 ntBASIC0.96□□□□□ -2.26
YBX1P67809 AL353765.1-201ENST00000605514 183 ntBASIC0.96□□□□□ -2.26
YBX1P67809 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
YBX1P67809 SNORA36.2-201ENST00000384004 127 ntBASIC0.95□□□□□ -2.26
YBX1P67809 SNORD110-201ENST00000408189 75 ntBASIC0.95□□□□□ -2.26
YBX1P67809 MIR7107-201ENST00000611489 80 ntBASIC0.95□□□□□ -2.26
YBX1P67809 Y_RNA.407-201ENST00000383986 113 ntBASIC0.94□□□□□ -2.26
YBX1P67809 snoU13.13-201ENST00000458842 104 ntBASIC0.94□□□□□ -2.26
YBX1P67809 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
YBX1P67809 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
YBX1P67809 MIR4473-201ENST00000583731 91 ntBASIC0.94□□□□□ -2.26
YBX1P67809 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
YBX1P67809 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
YBX1P67809 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
YBX1P67809 Y_RNA.115-201ENST00000363272 98 ntBASIC0.92□□□□□ -2.26
YBX1P67809 RNY1P8-201ENST00000383970 114 ntBASIC0.92□□□□□ -2.26
YBX1P67809 RNU6-1162P-201ENST00000384443 104 ntBASIC0.92□□□□□ -2.26
YBX1P67809 MIR652-201ENST00000385278 98 ntBASIC0.92□□□□□ -2.26
YBX1P67809 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
YBX1P67809 RNU6-656P-201ENST00000516785 107 ntBASIC0.92□□□□□ -2.26
YBX1P67809 MIR4752-201ENST00000579672 72 ntBASIC0.92□□□□□ -2.26
YBX1P67809 MIR6739-201ENST00000622461 75 ntBASIC0.92□□□□□ -2.26
YBX1P67809 MIR924-201ENST00000638017 53 ntBASIC0.92□□□□□ -2.26
YBX1P67809 Y_RNA.250-201ENST00000364542 110 ntBASIC0.91□□□□□ -2.26
YBX1P67809 RNU6-542P-201ENST00000516405 103 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms