Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.58□□□□□ -2.16
CHRNA4P43681 SNORA63.6-201ENST00000364921 119 ntBASIC1.57□□□□□ -2.16
CHRNA4P43681 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
CHRNA4P43681 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.57□□□□□ -2.16
CHRNA4P43681 MIR548X-201ENST00000580069 75 ntBASIC1.57□□□□□ -2.16
CHRNA4P43681 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHRNA4P43681 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
CHRNA4P43681 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHRNA4P43681 SNORA8.2-201ENST00000384372 139 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 SNORD116-16-201ENST00000384533 92 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 RNU6-910P-201ENST00000390844 107 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 SNORD116.2-201ENST00000391251 93 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
CHRNA4P43681 SNORA9.1-201ENST00000362412 131 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHRNA4P43681 RNU6-1246P-201ENST00000391064 107 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 RNU6-469P-201ENST00000516253 101 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
CHRNA4P43681 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
CHRNA4P43681 RNU6-269P-201ENST00000391077 97 ntBASIC1.54□□□□□ -2.16
CHRNA4P43681 SCARNA17.3-201ENST00000516381 125 ntBASIC1.54□□□□□ -2.16
CHRNA4P43681 MIR7110-201ENST00000612638 86 ntBASIC1.54□□□□□ -2.16
CHRNA4P43681 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHRNA4P43681 SNORD18A-201ENST00000363753 72 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 SNORA25.8-201ENST00000364831 128 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 RNA5SP484-201ENST00000458857 111 ntBASIC1.53□□□□□ -2.16
CHRNA4P43681 RNU6-838P-201ENST00000363399 108 ntBASIC1.52□□□□□ -2.17
CHRNA4P43681 RNU6-716P-201ENST00000365621 103 ntBASIC1.52□□□□□ -2.17
CHRNA4P43681 SNORA40B-201ENST00000385573 128 ntBASIC1.52□□□□□ -2.17
CHRNA4P43681 Y_RNA.74-201ENST00000362911 99 ntBASIC1.51□□□□□ -2.17
CHRNA4P43681 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
CHRNA4P43681 MIR545-201ENST00000385085 106 ntBASIC1.51□□□□□ -2.17
CHRNA4P43681 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
CHRNA4P43681 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
CHRNA4P43681 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHRNA4P43681 MIR548E-201ENST00000408287 88 ntBASIC1.5□□□□□ -2.17
CHRNA4P43681 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
CHRNA4P43681 AL021921.1-201ENST00000442774 93 ntBASIC1.5□□□□□ -2.17
CHRNA4P43681 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
CHRNA4P43681 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
CHRNA4P43681 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
CHRNA4P43681 MIR582-201ENST00000365731 98 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 Y_RNA.407-201ENST00000383986 113 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 MIR652-201ENST00000385278 98 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 CYP3A54P-201ENST00000566950 75 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 AL162376.1-201ENST00000624117 175 ntBASIC1.49□□□□□ -2.17
CHRNA4P43681 RNU6-42P-201ENST00000384165 107 ntBASIC1.48□□□□□ -2.17
CHRNA4P43681 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
CHRNA4P43681 Y_RNA.282-201ENST00000364793 102 ntBASIC1.47□□□□□ -2.17
CHRNA4P43681 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
CHRNA4P43681 SCARNA16.5-201ENST00000517114 183 ntBASIC1.47□□□□□ -2.17
CHRNA4P43681 MIR1276-201ENST00000408707 83 ntBASIC1.46□□□□□ -2.18
CHRNA4P43681 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
CHRNA4P43681 RNU6-518P-201ENST00000516056 96 ntBASIC1.46□□□□□ -2.18
CHRNA4P43681 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
CHRNA4P43681 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
CHRNA4P43681 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CHRNA4P43681 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHRNA4P43681 RNU6-810P-201ENST00000364001 107 ntBASIC1.45□□□□□ -2.18
CHRNA4P43681 RNU6-392P-201ENST00000364926 101 ntBASIC1.45□□□□□ -2.18
CHRNA4P43681 RNU1-92P-201ENST00000517017 135 ntBASIC1.45□□□□□ -2.18
CHRNA4P43681 MIR548AE1-201ENST00000583292 70 ntBASIC1.45□□□□□ -2.18
CHRNA4P43681 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CHRNA4P43681 MIR527-201ENST00000385244 85 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 U7.7-201ENST00000459276 60 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 RNA5SP220-201ENST00000516298 104 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 RNU6-1110P-201ENST00000516462 101 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 MIR3678-201ENST00000578455 94 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 U6.96-201ENST00000636425 70 ntBASIC1.44□□□□□ -2.18
CHRNA4P43681 RNU6-247P-201ENST00000362636 107 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 SNORD1B-201ENST00000363091 84 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 RNU6-246P-201ENST00000384702 107 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 SNORD105-201ENST00000386910 85 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 RNU6-419P-201ENST00000517030 63 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 MIR6828-201ENST00000636181 60 ntBASIC1.43□□□□□ -2.18
CHRNA4P43681 MIR516B1-201ENST00000385211 90 ntBASIC1.42□□□□□ -2.18
CHRNA4P43681 AC243829.3-201ENST00000622177 108 ntBASIC1.42□□□□□ -2.18
CHRNA4P43681 AC090617.8-201ENST00000623339 167 ntBASIC1.42□□□□□ -2.18
CHRNA4P43681 MIR519A2-201ENST00000384990 87 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 RNU6-1250P-201ENST00000391218 107 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 RNU6-172P-201ENST00000411000 93 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 AC002429.1-201ENST00000437672 148 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 MIR4452-201ENST00000583004 71 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 MIR4473-201ENST00000583731 91 ntBASIC1.41□□□□□ -2.18
CHRNA4P43681 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
CHRNA4P43681 MIR6734-201ENST00000621166 68 ntBASIC1.4□□□□□ -2.19
CHRNA4P43681 MIR573-201ENST00000384964 99 ntBASIC1.39□□□□□ -2.19
CHRNA4P43681 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
CHRNA4P43681 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
CHRNA4P43681 AC006210.1-201ENST00000424882 111 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms