Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 MIR6739-201ENST00000622461 75 ntBASIC1.48□□□□□ -2.17
HOXA10P31260 RNU6V-201ENST00000384105 107 ntBASIC1.47□□□□□ -2.17
HOXA10P31260 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
HOXA10P31260 RPS29P1-201ENST00000465274 159 ntBASIC1.47□□□□□ -2.17
HOXA10P31260 SNORA40.17-201ENST00000517256 115 ntBASIC1.47□□□□□ -2.17
HOXA10P31260 MT-TY-201ENST00000387409 66 ntBASIC1.46□□□□□ -2.18
HOXA10P31260 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HOXA10P31260 RNU6-656P-201ENST00000516785 107 ntBASIC1.46□□□□□ -2.18
HOXA10P31260 MIR4639-201ENST00000584938 69 ntBASIC1.46□□□□□ -2.18
HOXA10P31260 RNA5SP299-201ENST00000391203 116 ntBASIC1.45□□□□□ -2.18
HOXA10P31260 AC002350.1-201ENST00000490759 375 ntBASIC1.45□□□□□ -2.18
HOXA10P31260 AL136317.1-201ENST00000612653 226 ntBASIC1.45□□□□□ -2.18
HOXA10P31260 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
HOXA10P31260 Y_RNA.250-201ENST00000364542 110 ntBASIC1.44□□□□□ -2.18
HOXA10P31260 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
HOXA10P31260 SNORD28-201ENST00000384706 75 ntBASIC1.44□□□□□ -2.18
HOXA10P31260 MIR548J-201ENST00000408833 112 ntBASIC1.44□□□□□ -2.18
HOXA10P31260 RNU6-446P-201ENST00000362827 106 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 MIR216A-201ENST00000385063 110 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 RNU6-1089P-201ENST00000516473 104 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 RNU6-122P-201ENST00000516818 107 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 MIR4295-201ENST00000585286 85 ntBASIC1.43□□□□□ -2.18
HOXA10P31260 RNU6-302P-201ENST00000365249 107 ntBASIC1.42□□□□□ -2.18
HOXA10P31260 RNA5SP117-201ENST00000365294 118 ntBASIC1.42□□□□□ -2.18
HOXA10P31260 MIR644A-201ENST00000385262 94 ntBASIC1.42□□□□□ -2.18
HOXA10P31260 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
HOXA10P31260 AC244669.1-204ENST00000621564 178 ntBASIC1.42□□□□□ -2.18
HOXA10P31260 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
HOXA10P31260 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HOXA10P31260 MIR3938-201ENST00000582157 103 ntBASIC1.41□□□□□ -2.18
HOXA10P31260 RNU6-92P-201ENST00000605893 104 ntBASIC1.41□□□□□ -2.18
HOXA10P31260 SNORD114-4-201ENST00000363962 75 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 RNU6-990P-201ENST00000364385 104 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 RNU6-726P-201ENST00000364680 107 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 AC018659.1-201ENST00000551083 169 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 MIR4460-201ENST00000577862 86 ntBASIC1.4□□□□□ -2.19
HOXA10P31260 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HOXA10P31260 MIR373-201ENST00000362273 69 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 RNU1-141P-201ENST00000364623 158 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 MIR521-2-201ENST00000384818 87 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 RNU6-469P-201ENST00000516253 101 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 RNU6-1110P-201ENST00000516462 101 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 RNA5SP147-201ENST00000516493 109 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 Y_RNA.722-201ENST00000517279 114 ntBASIC1.38□□□□□ -2.19
HOXA10P31260 RNU6-1162P-201ENST00000384443 104 ntBASIC1.37□□□□□ -2.19
HOXA10P31260 RNA5SP47-201ENST00000517230 109 ntBASIC1.37□□□□□ -2.19
HOXA10P31260 SNORD18A-201ENST00000363753 72 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 SNORA8.2-201ENST00000384372 139 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 MIR193B-201ENST00000384907 83 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 RNU6-808P-201ENST00000391233 108 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 RNA5SP436-201ENST00000516020 115 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 MIR1273G-201ENST00000577677 100 ntBASIC1.36□□□□□ -2.19
HOXA10P31260 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HOXA10P31260 SNORD60.1-201ENST00000362451 73 ntBASIC1.35□□□□□ -2.19
HOXA10P31260 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
HOXA10P31260 MIR548L-201ENST00000408303 86 ntBASIC1.35□□□□□ -2.19
HOXA10P31260 MIR7978-201ENST00000636158 59 ntBASIC1.35□□□□□ -2.19
HOXA10P31260 Y_RNA.115-201ENST00000363272 98 ntBASIC1.34□□□□□ -2.19
HOXA10P31260 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
HOXA10P31260 AL157398.1-201ENST00000452981 186 ntBASIC1.34□□□□□ -2.19
HOXA10P31260 U7.7-201ENST00000459276 60 ntBASIC1.34□□□□□ -2.19
HOXA10P31260 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HOXA10P31260 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
HOXA10P31260 SNORD113-4-201ENST00000364802 75 ntBASIC1.33□□□□□ -2.2
HOXA10P31260 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
HOXA10P31260 SNORA75.1-201ENST00000391130 148 ntBASIC1.32□□□□□ -2.2
HOXA10P31260 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
HOXA10P31260 SCARNA16.5-201ENST00000517114 183 ntBASIC1.32□□□□□ -2.2
HOXA10P31260 AL627230.5-201ENST00000619807 58 ntBASIC1.32□□□□□ -2.2
HOXA10P31260 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
HOXA10P31260 RNA5SP62-201ENST00000363457 110 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 SNORA15B-2-201ENST00000384058 135 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 SNORA15B-1-201ENST00000384334 135 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 Y_RNA.633-201ENST00000459107 95 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 MIR548V-201ENST00000584165 80 ntBASIC1.31□□□□□ -2.2
HOXA10P31260 RNU6-698P-201ENST00000363523 107 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 RNU6-34P-201ENST00000364874 107 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 AC098934.3-201ENST00000430450 190 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 RNU7-174P-201ENST00000516248 59 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 RNU5B-6P-201ENST00000516765 68 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 MIR3678-201ENST00000578455 94 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 AL590095.2-201ENST00000604136 117 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 AL162376.1-201ENST00000624117 175 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.3□□□□□ -2.2
HOXA10P31260 MIR6828-201ENST00000636181 60 ntBASIC1.3□□□□□ -2.2
HOXA10P31260 RNA5SP257-201ENST00000363023 116 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 RNU6-716P-201ENST00000365621 103 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 RNU6-1184P-201ENST00000384588 108 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 MIR630-201ENST00000384957 97 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 MIR517B-201ENST00000385102 67 ntBASIC1.29□□□□□ -2.2
HOXA10P31260 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
HOXA10P31260 SNORD113-2-201ENST00000391082 72 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms