Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.8□□□□□ -2.54
CAPN3P20807 SNORD115-25-201ENST00000362619 82 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 RNU4-36P-201ENST00000364294 144 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 RNU6-54P-201ENST00000365563 107 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 MIR378F-201ENST00000578143 78 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.81□□□□□ -2.54
CAPN3P20807 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.82□□□□□ -2.54
CAPN3P20807 MIR204-201ENST00000385200 110 ntBASIC-0.82□□□□□ -2.54
CAPN3P20807 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.82□□□□□ -2.54
CAPN3P20807 RNU7-55P-201ENST00000459426 62 ntBASIC-0.82□□□□□ -2.54
CAPN3P20807 RNU6-75P-201ENST00000515944 104 ntBASIC-0.82□□□□□ -2.54
CAPN3P20807 AL513043.2-201ENST00000573941 143 ntBASIC-0.82□□□□□ -2.54
CAPN3P20807 MIR548A1-201ENST00000385041 97 ntBASIC-0.83□□□□□ -2.54
CAPN3P20807 RNU6-644P-201ENST00000391155 98 ntBASIC-0.83□□□□□ -2.54
CAPN3P20807 RNU6-346P-201ENST00000516288 111 ntBASIC-0.83□□□□□ -2.54
CAPN3P20807 RNU6-255P-201ENST00000516957 105 ntBASIC-0.83□□□□□ -2.54
CAPN3P20807 MIR6851-201ENST00000617060 67 ntBASIC-0.83□□□□□ -2.54
CAPN3P20807 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.84□□□□□ -2.54
CAPN3P20807 RNU6-813P-201ENST00000384691 107 ntBASIC-0.84□□□□□ -2.54
CAPN3P20807 RNU6-907P-201ENST00000390924 102 ntBASIC-0.84□□□□□ -2.54
CAPN3P20807 MIR548E-201ENST00000408287 88 ntBASIC-0.84□□□□□ -2.54
CAPN3P20807 RNU6-412P-201ENST00000516434 106 ntBASIC-0.84□□□□□ -2.54
CAPN3P20807 SNORA40.17-201ENST00000517256 115 ntBASIC-0.85□□□□□ -2.55
CAPN3P20807 MIR5704-201ENST00000584029 77 ntBASIC-0.85□□□□□ -2.55
CAPN3P20807 SNORD42B-201ENST00000458893 67 ntBASIC-0.86□□□□□ -2.55
CAPN3P20807 SNORD33.1-201ENST00000516213 88 ntBASIC-0.86□□□□□ -2.55
CAPN3P20807 RNU6-476P-201ENST00000384726 107 ntBASIC-0.87□□□□□ -2.55
CAPN3P20807 MIR196A1-201ENST00000388006 70 ntBASIC-0.87□□□□□ -2.55
CAPN3P20807 FGF7P7-201ENST00000514120 227 ntBASIC-0.87□□□□□ -2.55
CAPN3P20807 MIR4324-201ENST00000584846 72 ntBASIC-0.87□□□□□ -2.55
CAPN3P20807 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.88□□□□□ -2.55
CAPN3P20807 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.88□□□□□ -2.55
CAPN3P20807 RNU6-719P-201ENST00000516671 104 ntBASIC-0.88□□□□□ -2.55
CAPN3P20807 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.89□□□□□ -2.55
CAPN3P20807 RNU6-659P-201ENST00000516454 104 ntBASIC-0.89□□□□□ -2.55
CAPN3P20807 RNU6-502P-201ENST00000362419 108 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 SNORD114-3-201ENST00000364969 75 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 RNU6-880P-201ENST00000384526 107 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 RNY1P7-201ENST00000384743 110 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 RNU6-721P-201ENST00000410155 105 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 SNORA13-201ENST00000458790 133 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 AC021146.6-201ENST00000514659 117 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 AC103810.7-201ENST00000607821 91 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 MIR8068-201ENST00000618032 68 ntBASIC-0.9□□□□□ -2.55
CAPN3P20807 RNU6-973P-201ENST00000364690 107 ntBASIC-0.91□□□□□ -2.56
CAPN3P20807 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.91□□□□□ -2.56
CAPN3P20807 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.92□□□□□ -2.56
CAPN3P20807 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.92□□□□□ -2.56
CAPN3P20807 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
CAPN3P20807 RNU6-519P-201ENST00000410590 108 ntBASIC-0.92□□□□□ -2.56
CAPN3P20807 RNU7-85P-201ENST00000458851 63 ntBASIC-0.92□□□□□ -2.56
CAPN3P20807 SNORA63.2-201ENST00000362603 126 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.93□□□□□ -2.56
CAPN3P20807 SNORD22.1-201ENST00000516331 125 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 MIR3179-1-201ENST00000578940 84 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 MIR3179-2-201ENST00000579107 84 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 MIR3179-3-201ENST00000579566 84 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 MIR3179-4-201ENST00000617599 84 ntBASIC-0.93□□□□□ -2.56
CAPN3P20807 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 RNU6-209P-201ENST00000384118 107 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 RNU6-881P-201ENST00000516813 102 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 MIR3613-201ENST00000579844 87 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 MIR548Z-201ENST00000584743 97 ntBASIC-0.94□□□□□ -2.56
CAPN3P20807 SNORD116-14-201ENST00000383894 92 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 SNORD116-17-201ENST00000383929 92 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 SNORD116-15-201ENST00000384445 92 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 SNORD116-19-201ENST00000384729 92 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 MIR518B-201ENST00000385127 83 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 AC104996.3-201ENST00000590718 94 ntBASIC-0.95□□□□□ -2.56
CAPN3P20807 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.96□□□□□ -2.56
CAPN3P20807 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.96□□□□□ -2.56
CAPN3P20807 MIR3064-201ENST00000581130 66 ntBASIC-0.96□□□□□ -2.56
CAPN3P20807 MIR3668-201ENST00000582138 75 ntBASIC-0.96□□□□□ -2.56
CAPN3P20807 MIR6854-201ENST00000614935 69 ntBASIC-0.96□□□□□ -2.56
CAPN3P20807 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 RNU6-132P-201ENST00000383863 107 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 SNORD116-21-201ENST00000384507 92 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 SNORD83B-201ENST00000386745 93 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.97□□□□□ -2.56
CAPN3P20807 MIR365A-201ENST00000362260 87 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 MIR517B-201ENST00000385102 67 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 RNU6-972P-201ENST00000391208 107 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 SNORD4B-201ENST00000459083 72 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 SCARNA17-201ENST00000516183 144 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 RNA5SP461-201ENST00000516451 104 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 RNU6-62P-201ENST00000516526 102 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 MIR3671-201ENST00000580455 88 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 MIR3140-201ENST00000583685 90 ntBASIC-0.98□□□□□ -2.57
CAPN3P20807 MIR6773-201ENST00000612812 74 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms