Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-158P-201ENST00000517104 100 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 MIR8087-201ENST00000612745 78 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 RNU6-495P-201ENST00000362995 107 ntBASIC-0.22□□□□□ -2.44
MT-ND1P03886 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
MT-ND1P03886 AP001318.4-201ENST00000616637 121 ntBASIC-0.22□□□□□ -2.44
MT-ND1P03886 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
MT-ND1P03886 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
MT-ND1P03886 MIR548E-201ENST00000408287 88 ntBASIC-0.23□□□□□ -2.45
MT-ND1P03886 snoU13.17-201ENST00000458802 104 ntBASIC-0.23□□□□□ -2.45
MT-ND1P03886 AC097510.1-201ENST00000510945 133 ntBASIC-0.23□□□□□ -2.45
MT-ND1P03886 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 SNORD49B-201ENST00000365172 72 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 RNU7-153P-201ENST00000516455 62 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 AC145423.2-201ENST00000610631 239 ntBASIC-0.24□□□□□ -2.45
MT-ND1P03886 SNORD115-27-201ENST00000364430 82 ntBASIC-0.25□□□□□ -2.45
MT-ND1P03886 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.25□□□□□ -2.45
MT-ND1P03886 RNU6-147P-201ENST00000383983 107 ntBASIC-0.25□□□□□ -2.45
MT-ND1P03886 RNU6-919P-201ENST00000516731 104 ntBASIC-0.25□□□□□ -2.45
MT-ND1P03886 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 RNU6-44P-201ENST00000384045 107 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 MTATP6P29-201ENST00000415057 132 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 MIR4796-201ENST00000580742 81 ntBASIC-0.26□□□□□ -2.45
MT-ND1P03886 SNORD114-4-201ENST00000363962 75 ntBASIC-0.27□□□□□ -2.45
MT-ND1P03886 RNY4P3-201ENST00000365254 95 ntBASIC-0.27□□□□□ -2.45
MT-ND1P03886 AL035461.1-201ENST00000421490 332 ntBASIC-0.27□□□□□ -2.45
MT-ND1P03886 MIR2052-201ENST00000636055 55 ntBASIC-0.27□□□□□ -2.45
MT-ND1P03886 RNU6-824P-201ENST00000363724 104 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 RNU6-990P-201ENST00000364385 104 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
MT-ND1P03886 MIR1236-201ENST00000408340 102 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 RNU7-24P-201ENST00000458867 62 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 SNORA40.13-201ENST00000516379 120 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 AP000676.1-201ENST00000533307 52 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 MIR548AI-201ENST00000579940 88 ntBASIC-0.28□□□□□ -2.45
MT-ND1P03886 RNU6-640P-201ENST00000363693 105 ntBASIC-0.29□□□□□ -2.46
MT-ND1P03886 RNU6-382P-201ENST00000365181 106 ntBASIC-0.29□□□□□ -2.46
MT-ND1P03886 MIR9-2-201ENST00000384838 87 ntBASIC-0.29□□□□□ -2.46
MT-ND1P03886 SNORD75.2-201ENST00000408784 58 ntBASIC-0.29□□□□□ -2.46
MT-ND1P03886 MALAT1.1-201ENST00000618249 95 ntBASIC-0.29□□□□□ -2.46
MT-ND1P03886 MIR488-201ENST00000365739 83 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 RNU6-905P-201ENST00000384434 107 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 MIR1197-201ENST00000408818 88 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 AL590491.3-201ENST00000610731 82 ntBASIC-0.3□□□□□ -2.46
MT-ND1P03886 SNORD115-25-201ENST00000362619 82 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 RNU6-32P-201ENST00000383948 107 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 RNU6-13P-201ENST00000384248 107 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 RNU6-12P-201ENST00000384604 107 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 RNU6-41P-201ENST00000384741 107 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 SNORA40.17-201ENST00000517256 115 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 MIR4668-201ENST00000582284 70 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
MT-ND1P03886 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
MT-ND1P03886 RNU5F-1-201ENST00000362507 117 ntBASIC-0.33□□□□□ -2.46
MT-ND1P03886 RNU6-633P-201ENST00000362612 103 ntBASIC-0.33□□□□□ -2.46
MT-ND1P03886 MIR519C-201ENST00000385053 87 ntBASIC-0.33□□□□□ -2.46
MT-ND1P03886 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
MT-ND1P03886 MIR4773-1-201ENST00000637203 78 ntBASIC-0.33□□□□□ -2.46
MT-ND1P03886 RNU6-502P-201ENST00000362419 108 ntBASIC-0.34□□□□□ -2.46
MT-ND1P03886 MIR489-201ENST00000384923 84 ntBASIC-0.34□□□□□ -2.46
MT-ND1P03886 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.34□□□□□ -2.46
MT-ND1P03886 RNU6-267P-201ENST00000516714 103 ntBASIC-0.34□□□□□ -2.46
MT-ND1P03886 RNU6-219P-201ENST00000364728 107 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 RNU6-900P-201ENST00000384498 102 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 RNY1P7-201ENST00000384743 110 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 SNORD2-201ENST00000459163 69 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 RNA5SP330-201ENST00000517096 96 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 AC006254.2-201ENST00000603259 279 ntBASIC-0.35□□□□□ -2.47
MT-ND1P03886 SNORA63.6-201ENST00000364921 119 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 RNU6-402P-201ENST00000410678 103 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 snoU13.13-201ENST00000458842 104 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 RNU7-55P-201ENST00000459426 62 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 U6.81-201ENST00000612550 106 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
MT-ND1P03886 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.36□□□□□ -2.47
MT-ND1P03886 RNU6-497P-201ENST00000365316 104 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 SNORD116-22-201ENST00000384430 92 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 SNORD56B-201ENST00000384713 71 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 MIR203A-201ENST00000384836 110 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
MT-ND1P03886 RNU6-337P-201ENST00000391243 106 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.37□□□□□ -2.47
MT-ND1P03886 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 RNU6-260P-201ENST00000384092 107 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 MIR2909-201ENST00000617113 69 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.38□□□□□ -2.47
MT-ND1P03886 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.39□□□□□ -2.47
MT-ND1P03886 RNA5SP89-201ENST00000410300 108 ntBASIC-0.39□□□□□ -2.47
MT-ND1P03886 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.39□□□□□ -2.47
MT-ND1P03886 MIR4280-201ENST00000582178 76 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms