Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC093423.1-201ENST00000440817 142 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 RNA5SP484-201ENST00000458857 111 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 RNA5SP268-201ENST00000516828 124 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 MIR6509-201ENST00000614603 85 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 SNORA36.1-201ENST00000363424 132 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 SNORD45A-201ENST00000384512 84 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 RNU7-24P-201ENST00000458867 62 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
SRGAP3O43295 RNU6-1039P-201ENST00000383931 107 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 RNU6-895P-201ENST00000384125 103 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 SNORA8.2-201ENST00000384372 139 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 RNU6-649P-201ENST00000384463 107 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 MIR7-2-201ENST00000384970 110 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 RNU5B-6P-201ENST00000516765 68 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
SRGAP3O43295 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SRGAP3O43295 RNU6-540P-201ENST00000384622 101 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 Y_RNA.540-201ENST00000384638 111 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.95□□□□□ -2.26
SRGAP3O43295 SNORD42B-201ENST00000458893 67 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 RNU6-539P-201ENST00000516665 103 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 AL162376.1-201ENST00000624117 175 ntBASIC0.95□□□□□ -2.26
SRGAP3O43295 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
SRGAP3O43295 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
SRGAP3O43295 RNU6-881P-201ENST00000516813 102 ntBASIC0.94□□□□□ -2.26
SRGAP3O43295 RNA5SP480-201ENST00000516840 109 ntBASIC0.94□□□□□ -2.26
SRGAP3O43295 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
SRGAP3O43295 MIR7107-201ENST00000611489 80 ntBASIC0.94□□□□□ -2.26
SRGAP3O43295 RNU6-788P-201ENST00000390967 104 ntBASIC0.93□□□□□ -2.26
SRGAP3O43295 RNU6-663P-201ENST00000391105 106 ntBASIC0.93□□□□□ -2.26
SRGAP3O43295 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SRGAP3O43295 SNORD115-22-201ENST00000364456 82 ntBASIC0.92□□□□□ -2.26
SRGAP3O43295 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
SRGAP3O43295 AC006210.1-201ENST00000424882 111 ntBASIC0.92□□□□□ -2.26
SRGAP3O43295 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
SRGAP3O43295 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
SRGAP3O43295 MIR598-201ENST00000384868 97 ntBASIC0.91□□□□□ -2.26
SRGAP3O43295 AC069503.3-201ENST00000618674 145 ntBASIC0.91□□□□□ -2.26
SRGAP3O43295 AC073869.9-201ENST00000641610 120 ntBASIC0.91□□□□□ -2.26
SRGAP3O43295 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRGAP3O43295 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SRGAP3O43295 MIR4473-201ENST00000583731 91 ntBASIC0.9□□□□□ -2.27
SRGAP3O43295 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.9□□□□□ -2.27
SRGAP3O43295 SNORD113.1-201ENST00000363280 73 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 RNU6-590P-201ENST00000365039 107 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 RNA5SP147-201ENST00000516493 109 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 AC018659.1-201ENST00000551083 169 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 MIR4752-201ENST00000579672 72 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 MIR3657-201ENST00000584818 117 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
SRGAP3O43295 RNU6-990P-201ENST00000364385 104 ntBASIC0.88□□□□□ -2.27
SRGAP3O43295 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
SRGAP3O43295 SNORD110-201ENST00000408189 75 ntBASIC0.88□□□□□ -2.27
SRGAP3O43295 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
SRGAP3O43295 U6.111-201ENST00000636093 83 ntBASIC0.88□□□□□ -2.27
SRGAP3O43295 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
SRGAP3O43295 RNU6-260P-201ENST00000384092 107 ntBASIC0.87□□□□□ -2.27
SRGAP3O43295 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
SRGAP3O43295 SNORA25.18-201ENST00000607153 114 ntBASIC0.87□□□□□ -2.27
SRGAP3O43295 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
SRGAP3O43295 SNORD114-4-201ENST00000363962 75 ntBASIC0.86□□□□□ -2.27
SRGAP3O43295 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
SRGAP3O43295 RNU6-982P-201ENST00000516216 102 ntBASIC0.86□□□□□ -2.27
SRGAP3O43295 MIR6779-201ENST00000617283 64 ntBASIC0.86□□□□□ -2.27
SRGAP3O43295 RNU6-1216P-201ENST00000362590 107 ntBASIC0.85□□□□□ -2.27
SRGAP3O43295 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
SRGAP3O43295 SNORA70.25-201ENST00000612741 95 ntBASIC0.85□□□□□ -2.27
SRGAP3O43295 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.85□□□□□ -2.27
SRGAP3O43295 Y_RNA.340-201ENST00000365330 92 ntBASIC0.84□□□□□ -2.27
SRGAP3O43295 Y_RNA.407-201ENST00000383986 113 ntBASIC0.84□□□□□ -2.27
SRGAP3O43295 RNU6-800P-201ENST00000384473 103 ntBASIC0.84□□□□□ -2.27
SRGAP3O43295 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
SRGAP3O43295 SNORA2.1-201ENST00000363089 137 ntBASIC0.83□□□□□ -2.28
SRGAP3O43295 SNORD114-26-201ENST00000363543 72 ntBASIC0.83□□□□□ -2.28
SRGAP3O43295 RNA5SP325-201ENST00000363756 130 ntBASIC0.83□□□□□ -2.28
SRGAP3O43295 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SRGAP3O43295 RNU6-630P-201ENST00000391258 106 ntBASIC0.83□□□□□ -2.28
SRGAP3O43295 AC069271.1-201ENST00000445577 156 ntBASIC0.83□□□□□ -2.28
SRGAP3O43295 AC125388.1-201ENST00000459631 156 ntBASIC0.82□□□□□ -2.28
SRGAP3O43295 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
SRGAP3O43295 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
SRGAP3O43295 Y_RNA.443-201ENST00000384135 111 ntBASIC0.81□□□□□ -2.28
SRGAP3O43295 SNORD71-201ENST00000411292 86 ntBASIC0.81□□□□□ -2.28
SRGAP3O43295 MTND4LP1-201ENST00000446263 157 ntBASIC0.81□□□□□ -2.28
SRGAP3O43295 snoU13.13-201ENST00000458842 104 ntBASIC0.81□□□□□ -2.28
SRGAP3O43295 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
SRGAP3O43295 Y_RNA.205-201ENST00000364128 113 ntBASIC0.8□□□□□ -2.28
SRGAP3O43295 SNORD116-24-201ENST00000384549 92 ntBASIC0.8□□□□□ -2.28
SRGAP3O43295 MIR652-201ENST00000385278 98 ntBASIC0.8□□□□□ -2.28
SRGAP3O43295 SNORA40.8-201ENST00000411034 126 ntBASIC0.8□□□□□ -2.28
SRGAP3O43295 SNORA40.17-201ENST00000517256 115 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms