Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC078883.4-201ENST00000623218 367 ntBASIC-3.32□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 AL035461.1-201ENST00000421490 332 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 RNU6-506P-201ENST00000516553 94 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 SNORA18.5-201ENST00000516616 101 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 MIR4282-201ENST00000583613 67 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 MIR548Z-201ENST00000584743 97 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.33□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 Y_RNA.559-201ENST00000384686 107 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 SNORA75.5-201ENST00000391291 81 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 RNU6-861P-201ENST00000516745 106 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.34□□□□□ -2.94
CHKB-CPT1BH3BT56 MIR1302-11-201ENST00000408051 138 ntBASIC-3.35□□□□□ -2.95
CHKB-CPT1BH3BT56 MIR1302-9-201ENST00000408365 138 ntBASIC-3.35□□□□□ -2.95
CHKB-CPT1BH3BT56 MIR1302-10-201ENST00000408734 138 ntBASIC-3.35□□□□□ -2.95
CHKB-CPT1BH3BT56 AL118496.2-201ENST00000448300 230 ntBASIC-3.35□□□□□ -2.95
CHKB-CPT1BH3BT56 MIR1302-2-201ENST00000607096 138 ntBASIC-3.35□□□□□ -2.95
CHKB-CPT1BH3BT56 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.36□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-752P-201ENST00000516376 102 ntBASIC-3.36□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-656P-201ENST00000516785 107 ntBASIC-3.37□□□□□ -2.95
CHKB-CPT1BH3BT56 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.37□□□□□ -2.95
CHKB-CPT1BH3BT56 MIR429-201ENST00000362106 83 ntBASIC-3.38□□□□□ -2.95
CHKB-CPT1BH3BT56 RNY4P9-201ENST00000363194 97 ntBASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 RNY4P7-201ENST00000364600 96 ntBASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-644P-201ENST00000391155 98 ntBASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.39□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-770P-201ENST00000363929 105 ntBASIC-3.4□□□□□ -2.95
CHKB-CPT1BH3BT56 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.4□□□□□ -2.95
CHKB-CPT1BH3BT56 MIR548A3-201ENST00000385297 97 ntBASIC-3.4□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.4□□□□□ -2.95
CHKB-CPT1BH3BT56 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.4□□□□□ -2.95
CHKB-CPT1BH3BT56 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-598P-201ENST00000364017 105 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-275P-201ENST00000364910 107 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 RBMX2P4-201ENST00000441256 376 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 AC002553.4-201ENST00000616896 331 ntBASIC-3.41□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-230P-201ENST00000362457 104 ntBASIC-3.42□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.42□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.42□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.42□□□□□ -2.96
CHKB-CPT1BH3BT56 MIR3170-201ENST00000582699 77 ntBASIC-3.42□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-682P-201ENST00000363843 106 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 RNY3P15-201ENST00000516297 97 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.43□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 SNORD116-29-201ENST00000384516 83 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-519P-201ENST00000410590 108 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 AC097484.2-201ENST00000509147 251 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 AC113139.1-201ENST00000605049 239 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 MTND4LP32-201ENST00000636111 270 ntBASIC-3.44□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-816P-201ENST00000390914 107 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 SNORA40.15-201ENST00000516884 107 ntBASIC-3.45□□□□□ -2.96
CHKB-CPT1BH3BT56 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.46□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.46□□□□□ -2.96
CHKB-CPT1BH3BT56 MIR4439-201ENST00000583746 80 ntBASIC-3.46□□□□□ -2.96
CHKB-CPT1BH3BT56 U2.14-201ENST00000615943 113 ntBASIC-3.46□□□□□ -2.96
CHKB-CPT1BH3BT56 AC013734.1-201ENST00000619329 111 ntBASIC-3.46□□□□□ -2.96
CHKB-CPT1BH3BT56 MIR577-201ENST00000385196 96 ntBASIC-3.47□□□□□ -2.96
CHKB-CPT1BH3BT56 MIR1252-201ENST00000408861 65 ntBASIC-3.47□□□□□ -2.96
CHKB-CPT1BH3BT56 MIR6844-201ENST00000637122 62 ntBASIC-3.47□□□□□ -2.96
CHKB-CPT1BH3BT56 RNU2-16P-201ENST00000410712 136 ntBASIC-3.48□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.48□□□□□ -2.97
CHKB-CPT1BH3BT56 MIR3646-201ENST00000578301 84 ntBASIC-3.48□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 RNA5SP136-201ENST00000410906 107 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU7-152P-201ENST00000458982 64 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-415P-201ENST00000516252 97 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 MIR3144-201ENST00000579460 79 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 U2.18-201ENST00000622185 84 ntBASIC-3.49□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.5□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU6-141P-201ENST00000410499 105 ntBASIC-3.5□□□□□ -2.97
CHKB-CPT1BH3BT56 RNU7-174P-201ENST00000516248 59 ntBASIC-3.5□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.5□□□□□ -2.97
CHKB-CPT1BH3BT56 MIR3688-2-201ENST00000636963 87 ntBASIC-3.5□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.51□□□□□ -2.97
CHKB-CPT1BH3BT56 MIR4694-201ENST00000578534 80 ntBASIC-3.51□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms