Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RNU6-719P-201ENST00000516671 104 ntBASIC1.29□□□□□ -2.2
PCDHA11Q9Y5I1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
PCDHA11Q9Y5I1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-681P-201ENST00000364012 104 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-154P-201ENST00000384306 106 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 MIR942-201ENST00000401111 86 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 RNU7-104P-201ENST00000459398 79 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 MIR548AG2-201ENST00000581228 64 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 U6.81-201ENST00000612550 106 ntBASIC1.28□□□□□ -2.2
PCDHA11Q9Y5I1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-1015P-201ENST00000517121 99 ntBASIC1.27□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-824P-201ENST00000363724 104 ntBASIC1.26□□□□□ -2.21
PCDHA11Q9Y5I1 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
PCDHA11Q9Y5I1 MIR644A-201ENST00000385262 94 ntBASIC1.26□□□□□ -2.21
PCDHA11Q9Y5I1 RNA5SP436-201ENST00000516020 115 ntBASIC1.26□□□□□ -2.21
PCDHA11Q9Y5I1 MIR664A-201ENST00000626086 82 ntBASIC1.26□□□□□ -2.21
PCDHA11Q9Y5I1 Y_RNA.374-201ENST00000365606 101 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 MIR617-201ENST00000385030 97 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 SNORD124-201ENST00000459577 104 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 AC114801.3-201ENST00000510231 177 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-871P-201ENST00000516122 100 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-687P-201ENST00000516443 89 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 MIR4639-201ENST00000584938 69 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 AC067863.3-201ENST00000624172 122 ntBASIC1.25□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-330P-201ENST00000363015 107 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 SNORA8.1-201ENST00000384250 140 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 MIR216B-201ENST00000390186 82 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-587P-201ENST00000391282 106 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-469P-201ENST00000516253 101 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 MIR5000-201ENST00000577717 103 ntBASIC1.24□□□□□ -2.21
PCDHA11Q9Y5I1 SNORD28-201ENST00000384706 75 ntBASIC1.23□□□□□ -2.21
PCDHA11Q9Y5I1 MIR573-201ENST00000384964 99 ntBASIC1.23□□□□□ -2.21
PCDHA11Q9Y5I1 RN7SL793P-201ENST00000583259 296 ntBASIC1.23□□□□□ -2.21
PCDHA11Q9Y5I1 RNU6-634P-201ENST00000459134 106 ntBASIC1.22□□□□□ -2.21
PCDHA11Q9Y5I1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PCDHA11Q9Y5I1 AC244669.1-204ENST00000621564 178 ntBASIC1.22□□□□□ -2.21
PCDHA11Q9Y5I1 SNORD18A-201ENST00000363753 72 ntBASIC1.21□□□□□ -2.22
PCDHA11Q9Y5I1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.21□□□□□ -2.22
PCDHA11Q9Y5I1 MIR519E-201ENST00000385075 84 ntBASIC1.21□□□□□ -2.22
PCDHA11Q9Y5I1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-788P-201ENST00000390967 104 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 MIR3612-201ENST00000579753 87 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 AC025627.3-201ENST00000582078 182 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.2□□□□□ -2.22
PCDHA11Q9Y5I1 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 RNU7-74P-201ENST00000459104 62 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 MIR3675-201ENST00000583661 73 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 MIR4773-1-201ENST00000637203 78 ntBASIC1.19□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-382P-201ENST00000365181 106 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-274P-201ENST00000459566 107 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-539P-201ENST00000516665 103 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 RNA5SP47-201ENST00000517230 109 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 MIR3678-201ENST00000578455 94 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 MIR548O2-201ENST00000616090 70 ntBASIC1.18□□□□□ -2.22
PCDHA11Q9Y5I1 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
PCDHA11Q9Y5I1 MIR154-201ENST00000385243 84 ntBASIC1.17□□□□□ -2.22
PCDHA11Q9Y5I1 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-752P-201ENST00000516376 102 ntBASIC1.17□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-726P-201ENST00000364680 107 ntBASIC1.16□□□□□ -2.22
PCDHA11Q9Y5I1 SNORD75.2-201ENST00000408784 58 ntBASIC1.16□□□□□ -2.22
PCDHA11Q9Y5I1 RNU7-24P-201ENST00000458867 62 ntBASIC1.16□□□□□ -2.22
PCDHA11Q9Y5I1 CYP3A137P-201ENST00000562436 69 ntBASIC1.16□□□□□ -2.22
PCDHA11Q9Y5I1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PCDHA11Q9Y5I1 RNU6-590P-201ENST00000365039 107 ntBASIC1.15□□□□□ -2.23
PCDHA11Q9Y5I1 MIR548L-201ENST00000408303 86 ntBASIC1.15□□□□□ -2.23
PCDHA11Q9Y5I1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.15□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6-495P-201ENST00000362995 107 ntBASIC1.14□□□□□ -2.23
PCDHA11Q9Y5I1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PCDHA11Q9Y5I1 AC093423.1-201ENST00000440817 142 ntBASIC1.14□□□□□ -2.23
PCDHA11Q9Y5I1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
PCDHA11Q9Y5I1 SNORD115-31-201ENST00000365318 82 ntBASIC1.13□□□□□ -2.23
PCDHA11Q9Y5I1 AC244098.3-201ENST00000424803 96 ntBASIC1.13□□□□□ -2.23
PCDHA11Q9Y5I1 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
PCDHA11Q9Y5I1 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
PCDHA11Q9Y5I1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6-716P-201ENST00000365621 103 ntBASIC1.12□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6-540P-201ENST00000384622 101 ntBASIC1.12□□□□□ -2.23
PCDHA11Q9Y5I1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PCDHA11Q9Y5I1 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6-54P-201ENST00000365563 107 ntBASIC1.11□□□□□ -2.23
PCDHA11Q9Y5I1 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
PCDHA11Q9Y5I1 MIR6828-201ENST00000636181 60 ntBASIC1.11□□□□□ -2.23
PCDHA11Q9Y5I1 MIR18A-201ENST00000362310 71 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 SNORD45.1-201ENST00000363181 77 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 RNU4-45P-201ENST00000365469 141 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6V-201ENST00000384105 107 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 RNU6-649P-201ENST00000384463 107 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 AL691482.2-201ENST00000457453 84 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 222.3 ms