Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-411P-201ENST00000384451 107 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 AC073261.1-201ENST00000429409 121 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 MIR4484-201ENST00000582855 83 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 AL353765.1-201ENST00000605514 183 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 MIR548O2-201ENST00000616090 70 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 Y_RNA.788-201ENST00000622394 112 ntBASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
FOXD3Q9UJU5 RNU6-824P-201ENST00000363724 104 ntBASIC1.21□□□□□ -2.22
FOXD3Q9UJU5 RNU6-154P-201ENST00000384306 106 ntBASIC1.2□□□□□ -2.22
FOXD3Q9UJU5 MIR3134-201ENST00000579433 74 ntBASIC1.2□□□□□ -2.22
FOXD3Q9UJU5 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 AC093423.1-201ENST00000440817 142 ntBASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 RNU7-24P-201ENST00000458867 62 ntBASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 RNU6-752P-201ENST00000516376 102 ntBASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
FOXD3Q9UJU5 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 Y_RNA.565-201ENST00000384719 101 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 RNU6-274P-201ENST00000459566 107 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 RNA5SP102-201ENST00000516865 106 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 AL078603.1-201ENST00000603824 313 ntBASIC1.18□□□□□ -2.22
FOXD3Q9UJU5 SNORA8.1-201ENST00000384250 140 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 SNORA8.2-201ENST00000384372 139 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 SNORD75.2-201ENST00000408784 58 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 RNU6-70P-201ENST00000516438 60 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
FOXD3Q9UJU5 MIR7-2-201ENST00000384970 110 ntBASIC1.16□□□□□ -2.22
FOXD3Q9UJU5 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
FOXD3Q9UJU5 RNA5SP220-201ENST00000516298 104 ntBASIC1.16□□□□□ -2.22
FOXD3Q9UJU5 AL162376.1-201ENST00000624117 175 ntBASIC1.16□□□□□ -2.22
FOXD3Q9UJU5 MT-TY-201ENST00000387409 66 ntBASIC1.15□□□□□ -2.23
FOXD3Q9UJU5 RNA5SP227-201ENST00000516184 113 ntBASIC1.15□□□□□ -2.23
FOXD3Q9UJU5 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
FOXD3Q9UJU5 MIR4773-1-201ENST00000637203 78 ntBASIC1.15□□□□□ -2.23
FOXD3Q9UJU5 RNU6-495P-201ENST00000362995 107 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 Y_RNA.258-201ENST00000364613 105 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 RNU6-382P-201ENST00000365181 106 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 RNA5SP222-201ENST00000411039 105 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 RNU6-871P-201ENST00000516122 100 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 RNU6-523P-201ENST00000516304 54 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 MIR3675-201ENST00000583661 73 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.14□□□□□ -2.23
FOXD3Q9UJU5 RNU1-141P-201ENST00000364623 158 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 Y_RNA.540-201ENST00000384638 111 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 RNU6-269P-201ENST00000391077 97 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 RNA5SP268-201ENST00000516828 124 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 MIR4460-201ENST00000577862 86 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 MIR6734-201ENST00000621166 68 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 AC073869.9-201ENST00000641610 120 ntBASIC1.13□□□□□ -2.23
FOXD3Q9UJU5 SNORA36.1-201ENST00000363424 132 ntBASIC1.12□□□□□ -2.23
FOXD3Q9UJU5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
FOXD3Q9UJU5 RNU6-587P-201ENST00000391282 106 ntBASIC1.12□□□□□ -2.23
FOXD3Q9UJU5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXD3Q9UJU5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNU6-330P-201ENST00000363015 107 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 SNORD114-22-201ENST00000365423 72 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNU6V-201ENST00000384105 107 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 MIR608-201ENST00000384820 100 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNU6-687P-201ENST00000516443 89 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNA5SP480-201ENST00000516840 109 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNU6-1015P-201ENST00000517121 99 ntBASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
FOXD3Q9UJU5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
FOXD3Q9UJU5 AC069503.3-201ENST00000618674 145 ntBASIC1.09□□□□□ -2.23
FOXD3Q9UJU5 RNU6-54P-201ENST00000365563 107 ntBASIC1.08□□□□□ -2.24
FOXD3Q9UJU5 AL691482.2-201ENST00000457453 84 ntBASIC1.08□□□□□ -2.24
FOXD3Q9UJU5 RNU6-634P-201ENST00000459134 106 ntBASIC1.08□□□□□ -2.24
FOXD3Q9UJU5 MIR7107-201ENST00000611489 80 ntBASIC1.07□□□□□ -2.24
FOXD3Q9UJU5 MIR664A-201ENST00000626086 82 ntBASIC1.07□□□□□ -2.24
FOXD3Q9UJU5 RNU6-1241P-201ENST00000384536 107 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 MIR154-201ENST00000385243 84 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 MIR140-201ENST00000385282 100 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 MIR8053-201ENST00000613344 75 ntBASIC1.06□□□□□ -2.24
FOXD3Q9UJU5 RNU6-1039P-201ENST00000383931 107 ntBASIC1.05□□□□□ -2.24
FOXD3Q9UJU5 SNORA36.2-201ENST00000384004 127 ntBASIC1.05□□□□□ -2.24
FOXD3Q9UJU5 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
FOXD3Q9UJU5 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
FOXD3Q9UJU5 SNORD114-4-201ENST00000363962 75 ntBASIC1.04□□□□□ -2.24
FOXD3Q9UJU5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
FOXD3Q9UJU5 NAMPTP3-201ENST00000569273 224 ntBASIC1.04□□□□□ -2.24
FOXD3Q9UJU5 AC022709.1-201ENST00000615967 87 ntBASIC1.04□□□□□ -2.24
FOXD3Q9UJU5 MIR96-201ENST00000362288 78 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 SNORD114-26-201ENST00000363543 72 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 AC114801.3-201ENST00000510231 177 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 MIR6509-201ENST00000614603 85 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 MIR6515-201ENST00000619843 57 ntBASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
FOXD3Q9UJU5 SNORD42B-201ENST00000458893 67 ntBASIC1.01□□□□□ -2.25
FOXD3Q9UJU5 AC092634.7-201ENST00000621022 103 ntBASIC1.01□□□□□ -2.25
FOXD3Q9UJU5 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
FOXD3Q9UJU5 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms