Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
CUEDC1Q9NWM3 MIR100-201ENST00000385259 80 ntBASIC1.8□□□□□ -2.12
CUEDC1Q9NWM3 SNORA70.22-201ENST00000517160 124 ntBASIC1.8□□□□□ -2.12
CUEDC1Q9NWM3 MIR6739-201ENST00000622461 75 ntBASIC1.8□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-446P-201ENST00000362827 106 ntBASIC1.79□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-910P-201ENST00000390844 107 ntBASIC1.79□□□□□ -2.12
CUEDC1Q9NWM3 RPS29P23-201ENST00000458635 123 ntBASIC1.79□□□□□ -2.12
CUEDC1Q9NWM3 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
CUEDC1Q9NWM3 MIR3938-201ENST00000582157 103 ntBASIC1.79□□□□□ -2.12
CUEDC1Q9NWM3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 RNU6V-201ENST00000384105 107 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 RNU1-123P-201ENST00000458950 160 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-656P-201ENST00000516785 107 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-92P-201ENST00000605893 104 ntBASIC1.78□□□□□ -2.12
CUEDC1Q9NWM3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 SNORA25.8-201ENST00000364831 128 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 MIR520F-201ENST00000384824 87 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 SNORD42B-201ENST00000458893 67 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
CUEDC1Q9NWM3 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
CUEDC1Q9NWM3 MIR1827-201ENST00000408549 66 ntBASIC1.76□□□□□ -2.13
CUEDC1Q9NWM3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CUEDC1Q9NWM3 MIR26B-201ENST00000362251 77 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 RNA5SP327-201ENST00000362494 101 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 MT-TY-201ENST00000387409 66 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 SNORD41.1-201ENST00000391000 69 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 SNORD79.1-201ENST00000516069 84 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 MIR7978-201ENST00000636158 59 ntBASIC1.75□□□□□ -2.13
CUEDC1Q9NWM3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 SNORD114-4-201ENST00000363962 75 ntBASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 SNORD26-201ENST00000384147 75 ntBASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 MIR4639-201ENST00000584938 69 ntBASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CUEDC1Q9NWM3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.73□□□□□ -2.13
CUEDC1Q9NWM3 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
CUEDC1Q9NWM3 SNORA40.17-201ENST00000517256 115 ntBASIC1.73□□□□□ -2.13
CUEDC1Q9NWM3 RMST_2.1-201ENST00000617263 136 ntBASIC1.73□□□□□ -2.13
CUEDC1Q9NWM3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CUEDC1Q9NWM3 RNA5SP117-201ENST00000365294 118 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 SNORD12-201ENST00000391002 90 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 AC018659.1-201ENST00000551083 169 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 AL136317.1-201ENST00000612653 226 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
CUEDC1Q9NWM3 RNU6-1184P-201ENST00000384588 108 ntBASIC1.71□□□□□ -2.14
CUEDC1Q9NWM3 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
CUEDC1Q9NWM3 AC002350.1-201ENST00000490759 375 ntBASIC1.71□□□□□ -2.14
CUEDC1Q9NWM3 MIR4460-201ENST00000577862 86 ntBASIC1.71□□□□□ -2.14
CUEDC1Q9NWM3 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
CUEDC1Q9NWM3 SNORD60.1-201ENST00000362451 73 ntBASIC1.7□□□□□ -2.14
CUEDC1Q9NWM3 RNU6-936P-201ENST00000384005 107 ntBASIC1.7□□□□□ -2.14
CUEDC1Q9NWM3 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
CUEDC1Q9NWM3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CUEDC1Q9NWM3 RNU6-990P-201ENST00000364385 104 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 MIR521-2-201ENST00000384818 87 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 RNU6-469P-201ENST00000516253 101 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 MIR6504-201ENST00000613520 61 ntBASIC1.69□□□□□ -2.14
CUEDC1Q9NWM3 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 SNORD28-201ENST00000384706 75 ntBASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 RNA5SP147-201ENST00000516493 109 ntBASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 AC244669.1-204ENST00000621564 178 ntBASIC1.68□□□□□ -2.14
CUEDC1Q9NWM3 SNORD113-4-201ENST00000364802 75 ntBASIC1.67□□□□□ -2.14
CUEDC1Q9NWM3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
CUEDC1Q9NWM3 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
CUEDC1Q9NWM3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.67□□□□□ -2.14
CUEDC1Q9NWM3 RNU1-141P-201ENST00000364623 158 ntBASIC1.66□□□□□ -2.14
CUEDC1Q9NWM3 RNU6-392P-201ENST00000364926 101 ntBASIC1.66□□□□□ -2.14
CUEDC1Q9NWM3 MIR548L-201ENST00000408303 86 ntBASIC1.66□□□□□ -2.14
CUEDC1Q9NWM3 MIR1276-201ENST00000408707 83 ntBASIC1.66□□□□□ -2.14
CUEDC1Q9NWM3 AL157398.1-201ENST00000452981 186 ntBASIC1.66□□□□□ -2.14
CUEDC1Q9NWM3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CUEDC1Q9NWM3 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-520P-201ENST00000384717 104 ntBASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 MIR644A-201ENST00000385262 94 ntBASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 SNORD113-2-201ENST00000391082 72 ntBASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 MIR548V-201ENST00000584165 80 ntBASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-726P-201ENST00000364680 107 ntBASIC1.64□□□□□ -2.15
CUEDC1Q9NWM3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-42P-201ENST00000384165 107 ntBASIC1.64□□□□□ -2.15
CUEDC1Q9NWM3 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-698P-201ENST00000363523 107 ntBASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-34P-201ENST00000364874 107 ntBASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 SNORA15B-1-201ENST00000384334 135 ntBASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 SNORA75.1-201ENST00000391130 148 ntBASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.63□□□□□ -2.15
CUEDC1Q9NWM3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms