Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 RNU7-107P-201ENST00000459121 61 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 RNU6-182P-201ENST00000516970 105 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 RNA5SP66-201ENST00000517178 101 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 MIR4432-201ENST00000581823 84 ntBASIC-0.59□□□□□ -2.5
TM9SF3Q9HD45 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 MIR224-201ENST00000384889 81 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 snoU13.13-201ENST00000458842 104 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.6□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 RNU6-257P-201ENST00000410238 98 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 RNU7-85P-201ENST00000458851 63 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 SNORD42B-201ENST00000458893 67 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 RNU6-346P-201ENST00000516288 111 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 AC096720.1-201ENST00000604441 183 ntBASIC-0.61□□□□□ -2.51
TM9SF3Q9HD45 AL157777.2-201ENST00000258070 137 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 RNU6-832P-201ENST00000363319 107 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 RNU6-30P-201ENST00000384561 107 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 MIR548E-201ENST00000408287 88 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 AL513043.2-201ENST00000573941 143 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.62□□□□□ -2.51
TM9SF3Q9HD45 RNU6-901P-201ENST00000384593 106 ntBASIC-0.63□□□□□ -2.51
TM9SF3Q9HD45 MIR4694-201ENST00000578534 80 ntBASIC-0.63□□□□□ -2.51
TM9SF3Q9HD45 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.63□□□□□ -2.51
TM9SF3Q9HD45 SNORD115-25-201ENST00000362619 82 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 SNORD50.2-201ENST00000365465 70 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 RNU6-132P-201ENST00000383863 107 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 RNU7-200P-201ENST00000516105 62 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 RNU6-65P-201ENST00000516332 98 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 RNU6-971P-201ENST00000516920 106 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 MIR4536-1-201ENST00000583537 88 ntBASIC-0.64□□□□□ -2.51
TM9SF3Q9HD45 RNU6-900P-201ENST00000384498 102 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 MIR548A1-201ENST00000385041 97 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 SNORA40-201ENST00000388090 126 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 SNORD38.3-201ENST00000516599 73 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 AC068339.1-201ENST00000526965 141 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 AC090425.1-201ENST00000610007 140 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
TM9SF3Q9HD45 RNY3P2-201ENST00000362918 102 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 MIR216B-201ENST00000390186 82 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 MIR3140-201ENST00000583685 90 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 MIR548Z-201ENST00000584743 97 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 MIR4436A-201ENST00000585278 85 ntBASIC-0.66□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 SNORD33.1-201ENST00000516213 88 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 MIR4280-201ENST00000582178 76 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 AC103810.7-201ENST00000607821 91 ntBASIC-0.67□□□□□ -2.52
TM9SF3Q9HD45 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
TM9SF3Q9HD45 RNU6-255P-201ENST00000516957 105 ntBASIC-0.68□□□□□ -2.52
TM9SF3Q9HD45 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.69□□□□□ -2.52
TM9SF3Q9HD45 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.69□□□□□ -2.52
TM9SF3Q9HD45 RNU7-55P-201ENST00000459426 62 ntBASIC-0.69□□□□□ -2.52
TM9SF3Q9HD45 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
TM9SF3Q9HD45 AL391099.1-201ENST00000624635 187 ntBASIC-0.69□□□□□ -2.52
TM9SF3Q9HD45 RNU6-476P-201ENST00000384726 107 ntBASIC-0.7□□□□□ -2.52
TM9SF3Q9HD45 RNU6-795P-201ENST00000516323 103 ntBASIC-0.7□□□□□ -2.52
TM9SF3Q9HD45 MIR4679-2-201ENST00000578358 77 ntBASIC-0.7□□□□□ -2.52
TM9SF3Q9HD45 AL627230.5-201ENST00000619807 58 ntBASIC-0.7□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.71□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.71□□□□□ -2.52
TM9SF3Q9HD45 MIR204-201ENST00000385200 110 ntBASIC-0.71□□□□□ -2.52
TM9SF3Q9HD45 MIR5009-201ENST00000578736 100 ntBASIC-0.71□□□□□ -2.52
TM9SF3Q9HD45 RNU6-502P-201ENST00000362419 108 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 SNORD90-201ENST00000391145 111 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 U3.27-201ENST00000391237 200 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 MIR3064-201ENST00000581130 66 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 MIR3914-2-201ENST00000637339 95 ntBASIC-0.72□□□□□ -2.52
TM9SF3Q9HD45 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.73□□□□□ -2.53
TM9SF3Q9HD45 RNA5SP292-201ENST00000390974 118 ntBASIC-0.73□□□□□ -2.53
TM9SF3Q9HD45 MIR548AX-201ENST00000580117 73 ntBASIC-0.73□□□□□ -2.53
TM9SF3Q9HD45 MIR6851-201ENST00000617060 67 ntBASIC-0.73□□□□□ -2.53
TM9SF3Q9HD45 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 RNU6-990P-201ENST00000364385 104 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 SNORD45B-201ENST00000364617 72 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 RNU6-813P-201ENST00000384691 107 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 SNORA19.1-201ENST00000410656 129 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 RNU4-63P-201ENST00000411313 118 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 SNORD4B-201ENST00000459083 72 ntBASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.74□□□□□ -2.53
TM9SF3Q9HD45 MIR4777-201ENST00000583710 86 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms