Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MIR320A-201ENST00000385302 82 ntBASIC1.63□□□□□ -2.15
EFCC1Q9HA90 RNU6-604P-201ENST00000390917 100 ntBASIC1.63□□□□□ -2.15
EFCC1Q9HA90 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
EFCC1Q9HA90 AL691482.2-201ENST00000457453 84 ntBASIC1.63□□□□□ -2.15
EFCC1Q9HA90 MIR548AG2-201ENST00000581228 64 ntBASIC1.63□□□□□ -2.15
EFCC1Q9HA90 Y_RNA.174-201ENST00000363781 105 ntBASIC1.62□□□□□ -2.15
EFCC1Q9HA90 Y_RNA.205-201ENST00000364128 113 ntBASIC1.62□□□□□ -2.15
EFCC1Q9HA90 MIR1827-201ENST00000408549 66 ntBASIC1.62□□□□□ -2.15
EFCC1Q9HA90 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
EFCC1Q9HA90 RNU6-881P-201ENST00000516813 102 ntBASIC1.62□□□□□ -2.15
EFCC1Q9HA90 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
EFCC1Q9HA90 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 MIR203A-201ENST00000384836 110 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 AC244098.3-201ENST00000424803 96 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 NAMPTP3-201ENST00000569273 224 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 MIR151B-201ENST00000584249 96 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 MIR6788-201ENST00000618842 66 ntBASIC1.61□□□□□ -2.15
EFCC1Q9HA90 RNA5SP403-201ENST00000363598 108 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 Y_RNA.374-201ENST00000365606 101 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 Y_RNA.386-201ENST00000383913 105 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 RNU6-1126P-201ENST00000384002 107 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 U3.27-201ENST00000391237 200 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 RNU6-630P-201ENST00000391258 106 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 MIR3920-201ENST00000581751 86 ntBASIC1.6□□□□□ -2.15
EFCC1Q9HA90 SNORD114-27-201ENST00000363766 70 ntBASIC1.59□□□□□ -2.15
EFCC1Q9HA90 MIR548L-201ENST00000408303 86 ntBASIC1.59□□□□□ -2.15
EFCC1Q9HA90 MIR1265-201ENST00000408444 86 ntBASIC1.59□□□□□ -2.15
EFCC1Q9HA90 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.59□□□□□ -2.15
EFCC1Q9HA90 AC067863.3-201ENST00000624172 122 ntBASIC1.59□□□□□ -2.15
EFCC1Q9HA90 SNORD115-22-201ENST00000364456 82 ntBASIC1.58□□□□□ -2.16
EFCC1Q9HA90 SNORA25-201ENST00000384384 134 ntBASIC1.57□□□□□ -2.16
EFCC1Q9HA90 MIR548J-201ENST00000408833 112 ntBASIC1.57□□□□□ -2.16
EFCC1Q9HA90 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.57□□□□□ -2.16
EFCC1Q9HA90 AC002350.1-201ENST00000490759 375 ntBASIC1.57□□□□□ -2.16
EFCC1Q9HA90 RNU6-469P-201ENST00000516253 101 ntBASIC1.57□□□□□ -2.16
EFCC1Q9HA90 MIR8053-201ENST00000613344 75 ntBASIC1.57□□□□□ -2.16
EFCC1Q9HA90 SNORD113.1-201ENST00000363280 73 ntBASIC1.56□□□□□ -2.16
EFCC1Q9HA90 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
EFCC1Q9HA90 RNU6-54P-201ENST00000365563 107 ntBASIC1.55□□□□□ -2.16
EFCC1Q9HA90 AC005520.4-201ENST00000604337 90 ntBASIC1.55□□□□□ -2.16
EFCC1Q9HA90 MIR6509-201ENST00000614603 85 ntBASIC1.55□□□□□ -2.16
EFCC1Q9HA90 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
EFCC1Q9HA90 MIR617-201ENST00000385030 97 ntBASIC1.54□□□□□ -2.16
EFCC1Q9HA90 MIR519E-201ENST00000385075 84 ntBASIC1.54□□□□□ -2.16
EFCC1Q9HA90 AC244669.1-204ENST00000621564 178 ntBASIC1.54□□□□□ -2.16
EFCC1Q9HA90 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
EFCC1Q9HA90 RNU6-1216P-201ENST00000362590 107 ntBASIC1.53□□□□□ -2.16
EFCC1Q9HA90 RNU6-716P-201ENST00000365621 103 ntBASIC1.53□□□□□ -2.16
EFCC1Q9HA90 SNORD12-201ENST00000391002 90 ntBASIC1.53□□□□□ -2.16
EFCC1Q9HA90 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
EFCC1Q9HA90 RNU6V-201ENST00000384105 107 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 SNORD105-201ENST00000386910 85 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 SNORD75.2-201ENST00000408784 58 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 AC093423.1-201ENST00000440817 142 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 RNU6-982P-201ENST00000516216 102 ntBASIC1.52□□□□□ -2.17
EFCC1Q9HA90 Y_RNA.443-201ENST00000384135 111 ntBASIC1.51□□□□□ -2.17
EFCC1Q9HA90 MIR9-2-201ENST00000384838 87 ntBASIC1.51□□□□□ -2.17
EFCC1Q9HA90 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
EFCC1Q9HA90 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
EFCC1Q9HA90 AL109933.3-201ENST00000619095 188 ntBASIC1.5□□□□□ -2.17
EFCC1Q9HA90 MIR6767-201ENST00000637302 66 ntBASIC1.5□□□□□ -2.17
EFCC1Q9HA90 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.49□□□□□ -2.17
EFCC1Q9HA90 RNU6-495P-201ENST00000362995 107 ntBASIC1.49□□□□□ -2.17
EFCC1Q9HA90 RNU6-1039P-201ENST00000383931 107 ntBASIC1.49□□□□□ -2.17
EFCC1Q9HA90 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
EFCC1Q9HA90 RNU6-752P-201ENST00000516376 102 ntBASIC1.49□□□□□ -2.17
EFCC1Q9HA90 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
EFCC1Q9HA90 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 RNU6-1335P-201ENST00000365426 107 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 SNORD28-201ENST00000384706 75 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 FABP5P4-201ENST00000437203 171 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 RNU6-1110P-201ENST00000516462 101 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 RNA5SP147-201ENST00000516493 109 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 MIR548O2-201ENST00000616090 70 ntBASIC1.48□□□□□ -2.17
EFCC1Q9HA90 SNORD116-24-201ENST00000384549 92 ntBASIC1.47□□□□□ -2.17
EFCC1Q9HA90 MIR216B-201ENST00000390186 82 ntBASIC1.47□□□□□ -2.17
EFCC1Q9HA90 RNA5SP436-201ENST00000516020 115 ntBASIC1.47□□□□□ -2.17
EFCC1Q9HA90 MIR3678-201ENST00000578455 94 ntBASIC1.47□□□□□ -2.17
EFCC1Q9HA90 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
EFCC1Q9HA90 SNORA25.4-201ENST00000363666 124 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 RNU6-471P-201ENST00000383944 106 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 SNORD42B-201ENST00000458893 67 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 MIR4460-201ENST00000577862 86 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 MIR3612-201ENST00000579753 87 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 MIR4639-201ENST00000584938 69 ntBASIC1.46□□□□□ -2.18
EFCC1Q9HA90 U7.7-201ENST00000459276 60 ntBASIC1.45□□□□□ -2.18
EFCC1Q9HA90 SNORD18A-201ENST00000363753 72 ntBASIC1.44□□□□□ -2.18
EFCC1Q9HA90 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
EFCC1Q9HA90 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.44□□□□□ -2.18
EFCC1Q9HA90 RNU5B-6P-201ENST00000516765 68 ntBASIC1.44□□□□□ -2.18
EFCC1Q9HA90 RNU7-74P-201ENST00000459104 62 ntBASIC1.43□□□□□ -2.18
EFCC1Q9HA90 RN7SL793P-201ENST00000583259 296 ntBASIC1.43□□□□□ -2.18
EFCC1Q9HA90 RNU6-668P-201ENST00000364180 107 ntBASIC1.42□□□□□ -2.18
EFCC1Q9HA90 RNU7-24P-201ENST00000458867 62 ntBASIC1.42□□□□□ -2.18
EFCC1Q9HA90 RNU6-135P-201ENST00000516769 101 ntBASIC1.42□□□□□ -2.18
EFCC1Q9HA90 MIR3657-201ENST00000584818 117 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms