Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU4-11P-201ENST00000365287 132 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 RNU6-24P-201ENST00000384440 107 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 MIR548U-201ENST00000390728 81 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 MTCYBP6-201ENST00000441810 138 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 AL513043.2-201ENST00000573941 143 ntBASIC-1.36□□□□□ -2.63
VCX3BQ9H321 RNU6-35P-201ENST00000384530 107 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 MIR548A1-201ENST00000385041 97 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 MIR548AX-201ENST00000580117 73 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 AC132825.6-201ENST00000638861 357 ntBASIC-1.37□□□□□ -2.63
VCX3BQ9H321 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 MIR577-201ENST00000385196 96 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 RNU7-134P-201ENST00000458997 64 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 RNU6-781P-201ENST00000516377 101 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 AC104996.3-201ENST00000590718 94 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 AC141273.2-201ENST00000618989 130 ntBASIC-1.38□□□□□ -2.63
VCX3BQ9H321 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.39□□□□□ -2.63
VCX3BQ9H321 RNU6-746P-201ENST00000384112 109 ntBASIC-1.39□□□□□ -2.63
VCX3BQ9H321 RNY4P6-201ENST00000363667 96 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 SNORD114-15-201ENST00000364687 72 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 MIR29B1-201ENST00000385015 81 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 SNORD90-201ENST00000391145 111 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 snoU13.17-201ENST00000458802 104 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 RNU6-479P-201ENST00000516348 105 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.4□□□□□ -2.63
VCX3BQ9H321 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 SNORA33.1-201ENST00000364957 130 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 RNU6-111P-201ENST00000517179 105 ntBASIC-1.41□□□□□ -2.64
VCX3BQ9H321 RNU6-382P-201ENST00000365181 106 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 SNORA26.4-201ENST00000391188 123 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 MIR1255B2-201ENST00000408618 67 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 SNORD63.1-201ENST00000516178 80 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 RNA5SP147-201ENST00000516493 109 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 MIR4694-201ENST00000578534 80 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 MIR3128-201ENST00000581957 66 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 MIR4324-201ENST00000584846 72 ntBASIC-1.42□□□□□ -2.64
VCX3BQ9H321 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.43□□□□□ -2.64
VCX3BQ9H321 SNORA81.3-201ENST00000517283 198 ntBASIC-1.43□□□□□ -2.64
VCX3BQ9H321 AL117187.1-201ENST00000555482 181 ntBASIC-1.43□□□□□ -2.64
VCX3BQ9H321 MIR6738-201ENST00000619620 64 ntBASIC-1.43□□□□□ -2.64
VCX3BQ9H321 MIR6818-201ENST00000621576 65 ntBASIC-1.43□□□□□ -2.64
VCX3BQ9H321 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 RNU6-832P-201ENST00000363319 107 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 RNA5SP292-201ENST00000390974 118 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 AC044792.1-201ENST00000593294 196 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 AC006254.2-201ENST00000603259 279 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 AC072026.1-201ENST00000605023 201 ntBASIC-1.44□□□□□ -2.64
VCX3BQ9H321 RNU6-924P-201ENST00000362926 108 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 RNU6-151P-201ENST00000364158 107 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 RNY4P3-201ENST00000365254 95 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 AL158147.1-201ENST00000443970 75 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 SNORD4B-201ENST00000459083 72 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 RNU6-62P-201ENST00000516526 102 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 MIR3613-201ENST00000579844 87 ntBASIC-1.45□□□□□ -2.64
VCX3BQ9H321 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.45□□□□□ -2.64
VCX3BQ9H321 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 SNORD115-33-201ENST00000363723 82 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 RNU6-260P-201ENST00000384092 107 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 MIR203A-201ENST00000384836 110 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
VCX3BQ9H321 RNU2-51P-201ENST00000410708 197 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 MIR4439-201ENST00000583746 80 ntBASIC-1.46□□□□□ -2.64
VCX3BQ9H321 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 RNU6-576P-201ENST00000390854 102 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 RNU6-644P-201ENST00000391155 98 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.47□□□□□ -2.64
VCX3BQ9H321 AC103810.7-201ENST00000607821 91 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 AL035470.1-201ENST00000622571 220 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 AP001340.1-201ENST00000624405 217 ntBASIC-1.47□□□□□ -2.64
VCX3BQ9H321 RNY3P2-201ENST00000362918 102 ntBASIC-1.48□□□□□ -2.65
VCX3BQ9H321 SNORA2.1-201ENST00000363089 137 ntBASIC-1.48□□□□□ -2.65
VCX3BQ9H321 RNU6-824P-201ENST00000363724 104 ntBASIC-1.48□□□□□ -2.65
VCX3BQ9H321 SNORD115-22-201ENST00000364456 82 ntBASIC-1.48□□□□□ -2.65
VCX3BQ9H321 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.48□□□□□ -2.65
VCX3BQ9H321 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms