Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU6-439P-201ENST00000384188 106 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 MIR124-1-201ENST00000385275 85 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU4-47P-201ENST00000410876 114 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 AC096531.1-201ENST00000419107 107 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 AC079600.2-201ENST00000550076 130 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU1-29P-201ENST00000606574 126 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 AL591424.2-201ENST00000617023 128 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 MIR6132-201ENST00000622083 109 ntBASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-9Q9BYQ8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU6-79P-201ENST00000362511 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 Y_RNA.63-201ENST00000362841 102 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 SNORA36.1-201ENST00000363424 132 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU1-89P-201ENST00000384592 164 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 Y_RNA.540-201ENST00000384638 111 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU7-90P-201ENST00000459216 62 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 RNU7-55P-201ENST00000459426 62 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 MIR2114-201ENST00000516645 80 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 RN7SL660P-201ENST00000614852 299 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 MIR8068-201ENST00000618032 68 ntBASIC1.09□□□□□ -2.23
KRTAP4-9Q9BYQ8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-9Q9BYQ8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-9Q9BYQ8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-9Q9BYQ8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR184-201ENST00000384962 84 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR199A2-201ENST00000385289 110 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR934-201ENST00000401241 83 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNA5SP61-201ENST00000516453 100 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR4498-201ENST00000577599 66 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORA77B-201ENST00000578179 125 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR8070-201ENST00000616510 88 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 AP000553.6-201ENST00000641242 118 ntBASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-9Q9BYQ8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORA80D-201ENST00000384488 135 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNA5SP424-201ENST00000390988 115 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD88.1-201ENST00000408684 91 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNU6-863P-201ENST00000515989 104 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR486-1-201ENST00000612171 68 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR6733-201ENST00000635723 61 ntBASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-9Q9BYQ8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD115-33-201ENST00000363723 82 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORA71.1-201ENST00000364523 117 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 Y_RNA.349-201ENST00000365406 102 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD21-201ENST00000383953 95 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR27B-201ENST00000385129 97 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 UQCRHP3-201ENST00000451503 251 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 AL500527.2-201ENST00000454105 95 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD109B-201ENST00000458961 67 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD109A-201ENST00000459128 67 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNU6-983P-201ENST00000516004 103 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNU1-40P-201ENST00000516816 164 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNU1-97P-201ENST00000516872 164 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORD59.2-201ENST00000516873 68 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 U7.6-201ENST00000610841 64 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 AC084368.1-201ENST00000620935 65 ntBASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-9Q9BYQ8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 Y_RNA.30-201ENST00000362572 97 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 SNORA6-201ENST00000384033 151 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 RNU6-901P-201ENST00000384593 106 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 Z98941.1-201ENST00000407764 100 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR4648-201ENST00000580107 72 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR4303-201ENST00000581299 66 ntBASIC1.05□□□□□ -2.24
KRTAP4-9Q9BYQ8 MIR6854-201ENST00000614935 69 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms