Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR216B-201ENST00000390186 82 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 MIR548I1-201ENST00000408810 149 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 SNORD57-201ENST00000448188 72 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 RNU6-659P-201ENST00000516454 104 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 RNU6-971P-201ENST00000516920 106 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 AC025521.1-201ENST00000621624 286 ntBASIC-0.31□□□□□ -2.46
FOXC2Q99958 RNU6-80P-201ENST00000384195 107 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 RNU6-935P-201ENST00000410371 100 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 MIR5009-201ENST00000578736 100 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 MIR4439-201ENST00000583746 80 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 RNU6-86P-201ENST00000606534 107 ntBASIC-0.32□□□□□ -2.46
FOXC2Q99958 MIR20A-201ENST00000362279 71 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 U3.27-201ENST00000391237 200 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 AC244090.1-201ENST00000441884 93 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.33□□□□□ -2.46
FOXC2Q99958 RNU7-85P-201ENST00000458851 63 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 AC145423.2-201ENST00000610631 239 ntBASIC-0.33□□□□□ -2.46
FOXC2Q99958 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.34□□□□□ -2.46
FOXC2Q99958 SNORA49-201ENST00000386157 136 ntBASIC-0.34□□□□□ -2.46
FOXC2Q99958 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.34□□□□□ -2.46
FOXC2Q99958 AL513043.2-201ENST00000573941 143 ntBASIC-0.34□□□□□ -2.46
FOXC2Q99958 MIR548AX-201ENST00000580117 73 ntBASIC-0.34□□□□□ -2.46
FOXC2Q99958 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.35□□□□□ -2.47
FOXC2Q99958 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.35□□□□□ -2.47
FOXC2Q99958 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 SNORD14C-201ENST00000365382 88 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 MIR9-2-201ENST00000384838 87 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 SNORD33.1-201ENST00000516213 88 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 MIR4263-201ENST00000584745 83 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 U6.95-201ENST00000636931 70 ntBASIC-0.36□□□□□ -2.47
FOXC2Q99958 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.37□□□□□ -2.47
FOXC2Q99958 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 MIR548A1-201ENST00000385041 97 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 MIR451A-201ENST00000385059 72 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 MIR4536-1-201ENST00000583537 88 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 MIR4777-201ENST00000583710 86 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.37□□□□□ -2.47
FOXC2Q99958 RNU6-54P-201ENST00000365563 107 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 RNU6-907P-201ENST00000390924 102 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 RNU6-644P-201ENST00000391155 98 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 RNY1P9-201ENST00000532431 109 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 MIR3671-201ENST00000580455 88 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 MIR4788-201ENST00000639104 80 ntBASIC-0.38□□□□□ -2.47
FOXC2Q99958 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNORD45B-201ENST00000364617 72 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 MIR582-201ENST00000365731 98 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 RNU6-132P-201ENST00000383863 107 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 RNU6-900P-201ENST00000384498 102 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 RNU6-455P-201ENST00000384681 107 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 RNU6-813P-201ENST00000384691 107 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNX3P1X-201ENST00000414887 175 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNORD42B-201ENST00000458893 67 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNORD4B-201ENST00000459083 72 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNORD126-201ENST00000459475 77 ntBASIC-0.39□□□□□ -2.47
FOXC2Q99958 SNORD116-14-201ENST00000383894 92 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 SNORD116-17-201ENST00000383929 92 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 SNORD116-15-201ENST00000384445 92 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 SNORD116-19-201ENST00000384729 92 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 MIR548A3-201ENST00000385297 97 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 RNU7-55P-201ENST00000459426 62 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 RNU6-65P-201ENST00000516332 98 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 MIR548Z-201ENST00000584743 97 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 AC103810.7-201ENST00000607821 91 ntBASIC-0.4□□□□□ -2.47
FOXC2Q99958 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 SNORA24B-201ENST00000384176 131 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
FOXC2Q99958 MIR548E-201ENST00000408287 88 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 MIR3064-201ENST00000581130 66 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 MIR4723-201ENST00000585070 81 ntBASIC-0.41□□□□□ -2.48
FOXC2Q99958 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 RNU6-704P-201ENST00000364162 103 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 RNA5SP66-201ENST00000517178 101 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 MIR4280-201ENST00000582178 76 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 MIR3133-201ENST00000583157 78 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 AC012531.4-201ENST00000616509 177 ntBASIC-0.42□□□□□ -2.48
FOXC2Q99958 SNORA63.2-201ENST00000362603 126 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD115-25-201ENST00000362619 82 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms