Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-940P-201ENST00000363433 104 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 MIR7-2-201ENST00000384970 110 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 MIR1827-201ENST00000408549 66 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 MIR3198-2-201ENST00000577868 80 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 MIR548V-201ENST00000584165 80 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 MIR7978-201ENST00000636158 59 ntBASIC1.4□□□□□ -2.19
ATG4DQ86TL0 SNORA2.1-201ENST00000363089 137 ntBASIC1.39□□□□□ -2.19
ATG4DQ86TL0 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
ATG4DQ86TL0 AC244669.1-204ENST00000621564 178 ntBASIC1.39□□□□□ -2.19
ATG4DQ86TL0 RNA5SP117-201ENST00000365294 118 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 SNORA75.1-201ENST00000391130 148 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 AC002350.1-201ENST00000490759 375 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 RNU6-1089P-201ENST00000516473 104 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 MIR4498-201ENST00000577599 66 ntBASIC1.38□□□□□ -2.19
ATG4DQ86TL0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 SNORA7.1-201ENST00000363750 139 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
ATG4DQ86TL0 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 snoU13.13-201ENST00000458842 104 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 MIR4460-201ENST00000577862 86 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 MIR4422-201ENST00000581938 83 ntBASIC1.37□□□□□ -2.19
ATG4DQ86TL0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ATG4DQ86TL0 SNORD28-201ENST00000384706 75 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 MIR548C-201ENST00000384815 97 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 MT-TY-201ENST00000387409 66 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 MIR548L-201ENST00000408303 86 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
ATG4DQ86TL0 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
ATG4DQ86TL0 RNA5SP215-201ENST00000363440 122 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 SNORD113-4-201ENST00000364802 75 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 SNORD41.1-201ENST00000391000 69 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 SNORA67.5-201ENST00000391036 107 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 MIR6739-201ENST00000622461 75 ntBASIC1.35□□□□□ -2.19
ATG4DQ86TL0 RNU6-716P-201ENST00000365621 103 ntBASIC1.34□□□□□ -2.19
ATG4DQ86TL0 RNU7-74P-201ENST00000459104 62 ntBASIC1.34□□□□□ -2.19
ATG4DQ86TL0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.34□□□□□ -2.19
ATG4DQ86TL0 MIR4639-201ENST00000584938 69 ntBASIC1.34□□□□□ -2.19
ATG4DQ86TL0 RNU6-92P-201ENST00000605893 104 ntBASIC1.34□□□□□ -2.19
ATG4DQ86TL0 MIR630-201ENST00000384957 97 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 SNORD89-201ENST00000390981 114 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 AL157398.1-201ENST00000452981 186 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 RNU6-122P-201ENST00000516818 107 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 Y_RNA.722-201ENST00000517279 114 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 MIR3938-201ENST00000582157 103 ntBASIC1.33□□□□□ -2.2
ATG4DQ86TL0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ATG4DQ86TL0 RNU1-141P-201ENST00000364623 158 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 RNU6-726P-201ENST00000364680 107 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 RNU6-936P-201ENST00000384005 107 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 RNU6-469P-201ENST00000516253 101 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 AC018659.1-201ENST00000551083 169 ntBASIC1.32□□□□□ -2.2
ATG4DQ86TL0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
ATG4DQ86TL0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
ATG4DQ86TL0 SNORD60.1-201ENST00000362451 73 ntBASIC1.3□□□□□ -2.2
ATG4DQ86TL0 SNORD18A-201ENST00000363753 72 ntBASIC1.3□□□□□ -2.2
ATG4DQ86TL0 RNU6-269P-201ENST00000391077 97 ntBASIC1.3□□□□□ -2.2
ATG4DQ86TL0 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
ATG4DQ86TL0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ATG4DQ86TL0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ATG4DQ86TL0 RNU6-302P-201ENST00000365249 107 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 RNA5SP484-201ENST00000458857 111 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 RNU6-135P-201ENST00000516769 101 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 RNA5SP47-201ENST00000517230 109 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.29□□□□□ -2.2
ATG4DQ86TL0 SNORD105-201ENST00000386910 85 ntBASIC1.28□□□□□ -2.2
ATG4DQ86TL0 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
ATG4DQ86TL0 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
ATG4DQ86TL0 MIR3678-201ENST00000578455 94 ntBASIC1.28□□□□□ -2.2
ATG4DQ86TL0 MIR521-2-201ENST00000384818 87 ntBASIC1.27□□□□□ -2.21
ATG4DQ86TL0 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
ATG4DQ86TL0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ATG4DQ86TL0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
ATG4DQ86TL0 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
ATG4DQ86TL0 AC021146.9-201ENST00000512503 156 ntBASIC1.26□□□□□ -2.21
ATG4DQ86TL0 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
ATG4DQ86TL0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
ATG4DQ86TL0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ATG4DQ86TL0 RNU6-1312P-201ENST00000362425 108 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 SNORD114-4-201ENST00000363962 75 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.25□□□□□ -2.21
ATG4DQ86TL0 MIR3612-201ENST00000579753 87 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms