Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 U6.81-201ENST00000612550 106 ntBASIC1.03□□□□□ -2.24
HLA-DQA1Q5Y7H0 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.03□□□□□ -2.24
HLA-DQA1Q5Y7H0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-681P-201ENST00000364012 104 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-382P-201ENST00000365181 106 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-523P-201ENST00000516304 54 ntBASIC1.02□□□□□ -2.25
HLA-DQA1Q5Y7H0 SNORA36.1-201ENST00000363424 132 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-269P-201ENST00000391077 97 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU7-74P-201ENST00000459104 62 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR548O2-201ENST00000616090 70 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR6828-201ENST00000636181 60 ntBASIC1.01□□□□□ -2.25
HLA-DQA1Q5Y7H0 SNORA8.1-201ENST00000384250 140 ntBASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 Y_RNA.545-201ENST00000384652 105 ntBASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR216B-201ENST00000390186 82 ntBASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 AC093423.1-201ENST00000440817 142 ntBASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 Y_RNA.681-201ENST00000516445 113 ntBASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNY1P8-201ENST00000383970 114 ntBASIC0.99□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-411P-201ENST00000384451 107 ntBASIC0.99□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNA5SP227-201ENST00000516184 113 ntBASIC0.99□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNA5SP94-201ENST00000516917 108 ntBASIC0.99□□□□□ -2.25
HLA-DQA1Q5Y7H0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-54P-201ENST00000365563 107 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6V-201ENST00000384105 107 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNA5SP268-201ENST00000516828 124 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 NAMPTP3-201ENST00000569273 224 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.98□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU1-141P-201ENST00000364623 158 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-1015P-201ENST00000517121 99 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR4460-201ENST00000577862 86 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 MIR3675-201ENST00000583661 73 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
HLA-DQA1Q5Y7H0 RNU6-495P-201ENST00000362995 107 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU4-45P-201ENST00000365469 141 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNA5SP484-201ENST00000458857 111 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU6-274P-201ENST00000459566 107 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 AL162376.1-201ENST00000624117 175 ntBASIC0.96□□□□□ -2.26
HLA-DQA1Q5Y7H0 SNORA8.2-201ENST00000384372 139 ntBASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 MT-TY-201ENST00000387409 66 ntBASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 SNORD75.2-201ENST00000408784 58 ntBASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 AC073261.1-201ENST00000429409 121 ntBASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU6-687P-201ENST00000516443 89 ntBASIC0.95□□□□□ -2.26
HLA-DQA1Q5Y7H0 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
HLA-DQA1Q5Y7H0 SNORD42B-201ENST00000458893 67 ntBASIC0.94□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU5B-6P-201ENST00000516765 68 ntBASIC0.94□□□□□ -2.26
HLA-DQA1Q5Y7H0 MIR7107-201ENST00000611489 80 ntBASIC0.94□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU6-1241P-201ENST00000384536 107 ntBASIC0.93□□□□□ -2.26
HLA-DQA1Q5Y7H0 AL691482.2-201ENST00000457453 84 ntBASIC0.93□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU7-24P-201ENST00000458867 62 ntBASIC0.93□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.93□□□□□ -2.26
HLA-DQA1Q5Y7H0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.92□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNU6-587P-201ENST00000391282 106 ntBASIC0.92□□□□□ -2.26
HLA-DQA1Q5Y7H0 RNA5SP517-201ENST00000364724 117 ntBASIC0.91□□□□□ -2.26
HLA-DQA1Q5Y7H0 MIR203A-201ENST00000384836 110 ntBASIC0.9□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC018659.1-201ENST00000551083 169 ntBASIC0.9□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD45.1-201ENST00000363181 77 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD114-27-201ENST00000363766 70 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 RNU6-1039P-201ENST00000383931 107 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR154-201ENST00000385243 84 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR4752-201ENST00000579672 72 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR6509-201ENST00000614603 85 ntBASIC0.89□□□□□ -2.27
HLA-DQA1Q5Y7H0 RNU6-634P-201ENST00000459134 106 ntBASIC0.88□□□□□ -2.27
HLA-DQA1Q5Y7H0 RNU6-752P-201ENST00000516376 102 ntBASIC0.88□□□□□ -2.27
HLA-DQA1Q5Y7H0 RNA5SP102-201ENST00000516865 106 ntBASIC0.88□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC069503.3-201ENST00000618674 145 ntBASIC0.88□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD115-31-201ENST00000365318 82 ntBASIC0.87□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORA25.18-201ENST00000607153 114 ntBASIC0.87□□□□□ -2.27
HLA-DQA1Q5Y7H0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC139453.2-201ENST00000487255 133 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 RNU6-871P-201ENST00000516122 100 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORA70.25-201ENST00000612741 95 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC092634.7-201ENST00000621022 103 ntBASIC0.86□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD110-201ENST00000408189 75 ntBASIC0.85□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC006210.1-201ENST00000424882 111 ntBASIC0.85□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC073869.9-201ENST00000641610 120 ntBASIC0.85□□□□□ -2.27
HLA-DQA1Q5Y7H0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD115-22-201ENST00000364456 82 ntBASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 SNORD45A-201ENST00000384512 84 ntBASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 AC114801.3-201ENST00000510231 177 ntBASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
HLA-DQA1Q5Y7H0 MIR8070-201ENST00000616510 88 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms