Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR6509-201ENST00000614603 85 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RNU6-1039P-201ENST00000383931 107 ntBASIC1.57□□□□□ -2.16
RNF20Q5VTR2 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
RNF20Q5VTR2 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
RNF20Q5VTR2 MIR573-201ENST00000384964 99 ntBASIC1.56□□□□□ -2.16
RNF20Q5VTR2 SNORD41.1-201ENST00000391000 69 ntBASIC1.56□□□□□ -2.16
RNF20Q5VTR2 RNU7-24P-201ENST00000458867 62 ntBASIC1.56□□□□□ -2.16
RNF20Q5VTR2 AC005520.4-201ENST00000604337 90 ntBASIC1.56□□□□□ -2.16
RNF20Q5VTR2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RNF20Q5VTR2 RNU6-1216P-201ENST00000362590 107 ntBASIC1.55□□□□□ -2.16
RNF20Q5VTR2 SNORA25.8-201ENST00000364831 128 ntBASIC1.55□□□□□ -2.16
RNF20Q5VTR2 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
RNF20Q5VTR2 RNU7-74P-201ENST00000459104 62 ntBASIC1.55□□□□□ -2.16
RNF20Q5VTR2 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
RNF20Q5VTR2 RNU6-726P-201ENST00000364680 107 ntBASIC1.54□□□□□ -2.16
RNF20Q5VTR2 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
RNF20Q5VTR2 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
RNF20Q5VTR2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RNF20Q5VTR2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
RNF20Q5VTR2 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
RNF20Q5VTR2 SNORD42B-201ENST00000458893 67 ntBASIC1.53□□□□□ -2.16
RNF20Q5VTR2 RNU6-982P-201ENST00000516216 102 ntBASIC1.53□□□□□ -2.16
RNF20Q5VTR2 MIR4460-201ENST00000577862 86 ntBASIC1.53□□□□□ -2.16
RNF20Q5VTR2 RNA5SP432-201ENST00000362480 116 ntBASIC1.52□□□□□ -2.17
RNF20Q5VTR2 Y_RNA.443-201ENST00000384135 111 ntBASIC1.52□□□□□ -2.17
RNF20Q5VTR2 SNORD116-24-201ENST00000384549 92 ntBASIC1.52□□□□□ -2.17
RNF20Q5VTR2 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
RNF20Q5VTR2 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
RNF20Q5VTR2 AC093423.1-201ENST00000440817 142 ntBASIC1.51□□□□□ -2.17
RNF20Q5VTR2 RNU6-237P-201ENST00000515985 71 ntBASIC1.51□□□□□ -2.17
RNF20Q5VTR2 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
RNF20Q5VTR2 RNU7-95P-201ENST00000459222 64 ntBASIC1.5□□□□□ -2.17
RNF20Q5VTR2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF20Q5VTR2 AC025627.3-201ENST00000582078 182 ntBASIC1.5□□□□□ -2.17
RNF20Q5VTR2 MT-TY-201ENST00000387409 66 ntBASIC1.49□□□□□ -2.17
RNF20Q5VTR2 RNU6-269P-201ENST00000391077 97 ntBASIC1.49□□□□□ -2.17
RNF20Q5VTR2 AC011195.1-201ENST00000578177 177 ntBASIC1.49□□□□□ -2.17
RNF20Q5VTR2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
RNF20Q5VTR2 SNORA25.4-201ENST00000363666 124 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 RNU1-141P-201ENST00000364623 158 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 SNORD114-24-201ENST00000365029 72 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 RNU6-471P-201ENST00000383944 106 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 SNORD99-201ENST00000408612 74 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.48□□□□□ -2.17
RNF20Q5VTR2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
RNF20Q5VTR2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
RNF20Q5VTR2 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
RNF20Q5VTR2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.47□□□□□ -2.17
RNF20Q5VTR2 RNA5SP255-201ENST00000516370 107 ntBASIC1.47□□□□□ -2.17
RNF20Q5VTR2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.47□□□□□ -2.17
RNF20Q5VTR2 MIR3657-201ENST00000584818 117 ntBASIC1.47□□□□□ -2.17
RNF20Q5VTR2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.46□□□□□ -2.18
RNF20Q5VTR2 RNU6-260P-201ENST00000384092 107 ntBASIC1.46□□□□□ -2.18
RNF20Q5VTR2 AL603825.1-201ENST00000438481 80 ntBASIC1.46□□□□□ -2.18
RNF20Q5VTR2 AL109933.3-201ENST00000619095 188 ntBASIC1.46□□□□□ -2.18
RNF20Q5VTR2 MIR378A-201ENST00000362177 66 ntBASIC1.45□□□□□ -2.18
RNF20Q5VTR2 RNA5SP484-201ENST00000458857 111 ntBASIC1.45□□□□□ -2.18
RNF20Q5VTR2 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
RNF20Q5VTR2 RNA5SP147-201ENST00000516493 109 ntBASIC1.45□□□□□ -2.18
RNF20Q5VTR2 MIR18A-201ENST00000362310 71 ntBASIC1.44□□□□□ -2.18
RNF20Q5VTR2 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
RNF20Q5VTR2 RNU6-990P-201ENST00000364385 104 ntBASIC1.44□□□□□ -2.18
RNF20Q5VTR2 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
RNF20Q5VTR2 MIR9-2-201ENST00000384838 87 ntBASIC1.43□□□□□ -2.18
RNF20Q5VTR2 RNA5SP227-201ENST00000516184 113 ntBASIC1.43□□□□□ -2.18
RNF20Q5VTR2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
RNF20Q5VTR2 SNORA8.2-201ENST00000384372 139 ntBASIC1.42□□□□□ -2.18
RNF20Q5VTR2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RNF20Q5VTR2 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
RNF20Q5VTR2 MTND4LP1-201ENST00000446263 157 ntBASIC1.41□□□□□ -2.18
RNF20Q5VTR2 AC018659.1-201ENST00000551083 169 ntBASIC1.41□□□□□ -2.18
RNF20Q5VTR2 AC073869.9-201ENST00000641610 120 ntBASIC1.41□□□□□ -2.18
RNF20Q5VTR2 RNU6-668P-201ENST00000364180 107 ntBASIC1.4□□□□□ -2.19
RNF20Q5VTR2 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
RNF20Q5VTR2 SNORA36.1-201ENST00000363424 132 ntBASIC1.39□□□□□ -2.19
RNF20Q5VTR2 MIR6828-201ENST00000636181 60 ntBASIC1.39□□□□□ -2.19
RNF20Q5VTR2 RNU6-645P-201ENST00000364649 106 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 RNA5SP222-201ENST00000411039 105 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 RNA5SP268-201ENST00000516828 124 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 SNORA40.17-201ENST00000517256 115 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 AL162376.1-201ENST00000624117 175 ntBASIC1.38□□□□□ -2.19
RNF20Q5VTR2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.37□□□□□ -2.19
RNF20Q5VTR2 MIR7-2-201ENST00000384970 110 ntBASIC1.37□□□□□ -2.19
RNF20Q5VTR2 SNORA2.1-201ENST00000363089 137 ntBASIC1.36□□□□□ -2.19
RNF20Q5VTR2 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
RNF20Q5VTR2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.36□□□□□ -2.19
RNF20Q5VTR2 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
RNF20Q5VTR2 AC069503.3-201ENST00000618674 145 ntBASIC1.36□□□□□ -2.19
RNF20Q5VTR2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
RNF20Q5VTR2 RNA5SP94-201ENST00000516917 108 ntBASIC1.35□□□□□ -2.19
RNF20Q5VTR2 MIR4511-201ENST00000582784 87 ntBASIC1.35□□□□□ -2.19
RNF20Q5VTR2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.35□□□□□ -2.19
RNF20Q5VTR2 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
RNF20Q5VTR2 snoU13.13-201ENST00000458842 104 ntBASIC1.34□□□□□ -2.19
RNF20Q5VTR2 SNORD114-4-201ENST00000363962 75 ntBASIC1.33□□□□□ -2.2
RNF20Q5VTR2 MIR4498-201ENST00000577599 66 ntBASIC1.33□□□□□ -2.2
RNF20Q5VTR2 AC103706.3-201ENST00000636297 85 ntBASIC1.33□□□□□ -2.2
RNF20Q5VTR2 MIR7107-201ENST00000611489 80 ntBASIC1.32□□□□□ -2.2
RNF20Q5VTR2 AC006210.1-201ENST00000424882 111 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms