Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.43□□□□□ -2.96
CKS1BP61024 AC078883.4-201ENST00000623218 367 ntBASIC-3.43□□□□□ -2.96
CKS1BP61024 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-11-201ENST00000408051 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-9-201ENST00000408365 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-10-201ENST00000408734 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 AC113139.1-201ENST00000605049 239 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-2-201ENST00000607096 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 RNU2-38P-201ENST00000410856 79 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 RNU7-88P-201ENST00000458752 63 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 U7.5-201ENST00000517224 61 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 SNORD50.2-201ENST00000365465 70 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-132P-201ENST00000383863 107 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-518P-201ENST00000516056 96 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 MIR3688-2-201ENST00000636963 87 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-382P-201ENST00000365181 106 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 MIR521-2-201ENST00000384818 87 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 SNORA19.1-201ENST00000410656 129 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 MIR3657-201ENST00000584818 117 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 MIR6509-201ENST00000614603 85 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 RNU6-363P-201ENST00000362895 105 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-3.49□□□□□ -2.97
CKS1BP61024 AL021921.1-201ENST00000442774 93 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 RNU7-85P-201ENST00000458851 63 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 MIR4748-201ENST00000578076 82 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 AC021753.1-201ENST00000635724 168 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MT-TI-201ENST00000387365 69 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MIR548Q-201ENST00000408404 100 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 RNU6-651P-201ENST00000411040 105 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MIR3064-201ENST00000581130 66 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 AL442128.1-201ENST00000615151 90 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 AC025521.1-201ENST00000621624 286 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 SNORD18B-201ENST00000365659 72 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 SNORD116-29-201ENST00000384516 83 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 MTND4LP32-201ENST00000636111 270 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 MIR203A-201ENST00000384836 110 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 MIR4282-201ENST00000583613 67 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 SNORD116-1-201ENST00000384335 95 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-246P-201ENST00000384702 107 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 MIR759-201ENST00000390224 91 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 MTND1P29-201ENST00000448112 647 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 SNORA40.15-201ENST00000516884 107 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.53□□□□□ -2.97
CKS1BP61024 MIR23C-201ENST00000579846 100 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 AC104996.3-201ENST00000590718 94 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.54□□□□□ -2.98
CKS1BP61024 RNU6-409P-201ENST00000384114 104 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 SNORD116-2-201ENST00000384274 95 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-768P-201ENST00000384683 107 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU7-152P-201ENST00000458982 64 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 RNY4-201ENST00000516507 96 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 RNU6-62P-201ENST00000516526 102 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 MIR3974-201ENST00000637126 96 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 SNORA75.5-201ENST00000391291 81 ntBASIC-3.57□□□□□ -2.98
CKS1BP61024 MIR4773-1-201ENST00000637203 78 ntBASIC-3.57□□□□□ -2.98
CKS1BP61024 RNU6-508P-201ENST00000363231 103 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 RNU6-309P-201ENST00000364573 106 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 MIR3149-201ENST00000584629 83 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 AC002553.4-201ENST00000616896 331 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 U4.5-201ENST00000617137 123 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 U6.106-201ENST00000636360 105 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.59□□□□□ -2.98
CKS1BP61024 RNU6-258P-201ENST00000390884 101 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 MIR1252-201ENST00000408861 65 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 RNY3P15-201ENST00000516297 97 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 RNU6-770P-201ENST00000363929 105 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 AL691482.2-201ENST00000457453 84 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 MTATP6P29-201ENST00000415057 132 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 MIR6739-201ENST00000622461 75 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.62□□□□□ -2.99
CKS1BP61024 RNU6-608P-201ENST00000383927 104 ntBASIC-3.62□□□□□ -2.99
CKS1BP61024 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.62□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms