Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
MRE11P49959 RNU6-638P-201ENST00000516582 104 ntBASIC1.04□□□□□ -2.24
MRE11P49959 RNU6-135P-201ENST00000516769 101 ntBASIC1.04□□□□□ -2.24
MRE11P49959 MIR3612-201ENST00000579753 87 ntBASIC1.04□□□□□ -2.24
MRE11P49959 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
MRE11P49959 SNORD90-201ENST00000391145 111 ntBASIC1.03□□□□□ -2.24
MRE11P49959 RNU7-13P-201ENST00000516413 62 ntBASIC1.03□□□□□ -2.24
MRE11P49959 SNORA63.2-201ENST00000362603 126 ntBASIC1.02□□□□□ -2.25
MRE11P49959 Y_RNA.94-201ENST00000363068 106 ntBASIC1.02□□□□□ -2.25
MRE11P49959 RNU6-478P-201ENST00000363904 110 ntBASIC1.02□□□□□ -2.25
MRE11P49959 Y_RNA.207-201ENST00000364142 106 ntBASIC1.02□□□□□ -2.25
MRE11P49959 SNORD115-44-201ENST00000365391 82 ntBASIC1.02□□□□□ -2.25
MRE11P49959 MIR146A-201ENST00000385201 99 ntBASIC1.02□□□□□ -2.25
MRE11P49959 RNU6-129P-201ENST00000391022 107 ntBASIC1.02□□□□□ -2.25
MRE11P49959 RNU6-935P-201ENST00000410371 100 ntBASIC1.02□□□□□ -2.25
MRE11P49959 AL450471.1-201ENST00000447509 127 ntBASIC1.02□□□□□ -2.25
MRE11P49959 snoU13.19-201ENST00000459148 104 ntBASIC1.02□□□□□ -2.25
MRE11P49959 RNU7-104P-201ENST00000459398 79 ntBASIC1.02□□□□□ -2.25
MRE11P49959 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
MRE11P49959 MIR4712-201ENST00000583750 82 ntBASIC1.02□□□□□ -2.25
MRE11P49959 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MRE11P49959 SNORD28-201ENST00000384706 75 ntBASIC1.01□□□□□ -2.25
MRE11P49959 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
MRE11P49959 RNU6-857P-201ENST00000515893 110 ntBASIC1.01□□□□□ -2.25
MRE11P49959 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
MRE11P49959 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.01□□□□□ -2.25
MRE11P49959 SNORD18A-201ENST00000363753 72 ntBASIC1□□□□□ -2.25
MRE11P49959 RNU6-1051P-201ENST00000365471 102 ntBASIC1□□□□□ -2.25
MRE11P49959 RNA5SP193-201ENST00000410353 107 ntBASIC1□□□□□ -2.25
MRE11P49959 FGF7P7-201ENST00000514120 227 ntBASIC1□□□□□ -2.25
MRE11P49959 RNU6-287P-201ENST00000516230 98 ntBASIC1□□□□□ -2.25
MRE11P49959 RNU6-557P-201ENST00000516842 110 ntBASIC1□□□□□ -2.25
MRE11P49959 MIR3678-201ENST00000578455 94 ntBASIC1□□□□□ -2.25
MRE11P49959 MIR3920-201ENST00000581751 86 ntBASIC1□□□□□ -2.25
MRE11P49959 MIR4636-201ENST00000582271 80 ntBASIC1□□□□□ -2.25
MRE11P49959 AC244669.1-204ENST00000621564 178 ntBASIC1□□□□□ -2.25
MRE11P49959 RNU6-315P-201ENST00000362666 107 ntBASIC0.99□□□□□ -2.25
MRE11P49959 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
MRE11P49959 AC244098.3-201ENST00000424803 96 ntBASIC0.99□□□□□ -2.25
MRE11P49959 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
MRE11P49959 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
MRE11P49959 MIR4711-201ENST00000578274 70 ntBASIC0.99□□□□□ -2.25
MRE11P49959 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.99□□□□□ -2.25
MRE11P49959 RNU6-24P-201ENST00000384440 107 ntBASIC0.98□□□□□ -2.25
MRE11P49959 MIR451A-201ENST00000385059 72 ntBASIC0.98□□□□□ -2.25
MRE11P49959 RNU6-1108P-201ENST00000516308 104 ntBASIC0.98□□□□□ -2.25
MRE11P49959 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
MRE11P49959 MIR548AG2-201ENST00000581228 64 ntBASIC0.98□□□□□ -2.25
MRE11P49959 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
MRE11P49959 AC067863.3-201ENST00000624172 122 ntBASIC0.98□□□□□ -2.25
MRE11P49959 RNU6-161P-201ENST00000363051 106 ntBASIC0.97□□□□□ -2.25
MRE11P49959 RNU6-1229P-201ENST00000364295 107 ntBASIC0.97□□□□□ -2.25
MRE11P49959 RNU6-1126P-201ENST00000384002 107 ntBASIC0.97□□□□□ -2.25
MRE11P49959 MIR2113-201ENST00000459007 91 ntBASIC0.97□□□□□ -2.25
MRE11P49959 Y_RNA.660-201ENST00000516002 120 ntBASIC0.97□□□□□ -2.25
MRE11P49959 RNA5SP47-201ENST00000517230 109 ntBASIC0.97□□□□□ -2.25
MRE11P49959 MIR3140-201ENST00000583685 90 ntBASIC0.97□□□□□ -2.25
MRE11P49959 MIR4653-201ENST00000585107 83 ntBASIC0.97□□□□□ -2.25
MRE11P49959 MIR18A-201ENST00000362310 71 ntBASIC0.96□□□□□ -2.26
MRE11P49959 RNU6-686P-201ENST00000364839 107 ntBASIC0.96□□□□□ -2.26
MRE11P49959 RNY4P3-201ENST00000365254 95 ntBASIC0.96□□□□□ -2.26
MRE11P49959 SNORD77.2-201ENST00000391045 68 ntBASIC0.96□□□□□ -2.26
MRE11P49959 snoU13.17-201ENST00000458802 104 ntBASIC0.96□□□□□ -2.26
MRE11P49959 RNU6-1057P-201ENST00000517162 102 ntBASIC0.96□□□□□ -2.26
MRE11P49959 AL353765.1-201ENST00000605514 183 ntBASIC0.96□□□□□ -2.26
MRE11P49959 MIRLET7A1-201ENST00000362295 80 ntBASIC0.95□□□□□ -2.26
MRE11P49959 RNU5F-1-201ENST00000362507 117 ntBASIC0.95□□□□□ -2.26
MRE11P49959 RNU6-208P-201ENST00000362431 107 ntBASIC0.94□□□□□ -2.26
MRE11P49959 Y_RNA.244-201ENST00000364484 109 ntBASIC0.94□□□□□ -2.26
MRE11P49959 Y_RNA.264-201ENST00000364665 102 ntBASIC0.94□□□□□ -2.26
MRE11P49959 RNU6-30P-201ENST00000384561 107 ntBASIC0.94□□□□□ -2.26
MRE11P49959 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
MRE11P49959 SNORD41.1-201ENST00000391000 69 ntBASIC0.94□□□□□ -2.26
MRE11P49959 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.94□□□□□ -2.26
MRE11P49959 RNU4-45P-201ENST00000365469 141 ntBASIC0.93□□□□□ -2.26
MRE11P49959 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
MRE11P49959 SCARNA16.5-201ENST00000517114 183 ntBASIC0.93□□□□□ -2.26
MRE11P49959 RNU6-726P-201ENST00000364680 107 ntBASIC0.92□□□□□ -2.26
MRE11P49959 SNORA24B-201ENST00000384176 131 ntBASIC0.92□□□□□ -2.26
MRE11P49959 MIR519E-201ENST00000385075 84 ntBASIC0.92□□□□□ -2.26
MRE11P49959 U3.27-201ENST00000391237 200 ntBASIC0.92□□□□□ -2.26
MRE11P49959 RNU6-1052P-201ENST00000411398 104 ntBASIC0.92□□□□□ -2.26
MRE11P49959 RNU6-719P-201ENST00000516671 104 ntBASIC0.92□□□□□ -2.26
MRE11P49959 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MRE11P49959 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
MRE11P49959 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
MRE11P49959 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
MRE11P49959 RNU6-1094P-201ENST00000362416 104 ntBASIC0.9□□□□□ -2.27
MRE11P49959 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
MRE11P49959 MIR6759-201ENST00000638110 65 ntBASIC0.9□□□□□ -2.27
MRE11P49959 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
MRE11P49959 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
MRE11P49959 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
MRE11P49959 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.89□□□□□ -2.27
MRE11P49959 Y_RNA.12-201ENST00000362393 112 ntBASIC0.88□□□□□ -2.27
MRE11P49959 Y_RNA.532-201ENST00000384590 113 ntBASIC0.88□□□□□ -2.27
MRE11P49959 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
MRE11P49959 RNU6-380P-201ENST00000410207 107 ntBASIC0.88□□□□□ -2.27
MRE11P49959 RNU7-74P-201ENST00000459104 62 ntBASIC0.88□□□□□ -2.27
MRE11P49959 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms