Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
MMP13P45452 MIR499A-201ENST00000384903 122 ntBASIC0.77□□□□□ -2.29
MMP13P45452 AC093423.1-201ENST00000440817 142 ntBASIC0.77□□□□□ -2.29
MMP13P45452 RNU6-523P-201ENST00000516304 54 ntBASIC0.77□□□□□ -2.29
MMP13P45452 AC067863.3-201ENST00000624172 122 ntBASIC0.77□□□□□ -2.29
MMP13P45452 MIR664A-201ENST00000626086 82 ntBASIC0.77□□□□□ -2.29
MMP13P45452 MIR6828-201ENST00000636181 60 ntBASIC0.77□□□□□ -2.29
MMP13P45452 MIR617-201ENST00000385030 97 ntBASIC0.76□□□□□ -2.29
MMP13P45452 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
MMP13P45452 SCARNA16.5-201ENST00000517114 183 ntBASIC0.76□□□□□ -2.29
MMP13P45452 MIR3134-201ENST00000579433 74 ntBASIC0.76□□□□□ -2.29
MMP13P45452 Y_RNA.12-201ENST00000362393 112 ntBASIC0.75□□□□□ -2.29
MMP13P45452 RNU6-776P-201ENST00000364403 104 ntBASIC0.75□□□□□ -2.29
MMP13P45452 RNU6-1022P-201ENST00000365049 104 ntBASIC0.75□□□□□ -2.29
MMP13P45452 Y_RNA.371-201ENST00000365591 113 ntBASIC0.75□□□□□ -2.29
MMP13P45452 RNU6-269P-201ENST00000391077 97 ntBASIC0.75□□□□□ -2.29
MMP13P45452 AC074348.1-201ENST00000426503 132 ntBASIC0.75□□□□□ -2.29
MMP13P45452 RNU6-469P-201ENST00000516253 101 ntBASIC0.75□□□□□ -2.29
MMP13P45452 MIR4452-201ENST00000583004 71 ntBASIC0.75□□□□□ -2.29
MMP13P45452 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
MMP13P45452 RNU6-54P-201ENST00000365563 107 ntBASIC0.74□□□□□ -2.29
MMP13P45452 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
MMP13P45452 AC145423.2-201ENST00000610631 239 ntBASIC0.74□□□□□ -2.29
MMP13P45452 RNU5F-1-201ENST00000362507 117 ntBASIC0.73□□□□□ -2.29
MMP13P45452 RNU6-340P-201ENST00000364005 107 ntBASIC0.73□□□□□ -2.29
MMP13P45452 RNA5SP247-201ENST00000411181 105 ntBASIC0.73□□□□□ -2.29
MMP13P45452 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
MMP13P45452 Y_RNA.660-201ENST00000516002 120 ntBASIC0.73□□□□□ -2.29
MMP13P45452 RNU6-135P-201ENST00000516769 101 ntBASIC0.73□□□□□ -2.29
MMP13P45452 YWHAEP2-201ENST00000580066 112 ntBASIC0.73□□□□□ -2.29
MMP13P45452 YWHAEP3-201ENST00000582767 121 ntBASIC0.73□□□□□ -2.29
MMP13P45452 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
MMP13P45452 U6.81-201ENST00000612550 106 ntBASIC0.73□□□□□ -2.29
MMP13P45452 MIR548O2-201ENST00000616090 70 ntBASIC0.73□□□□□ -2.29
MMP13P45452 RNU6-1094P-201ENST00000362416 104 ntBASIC0.72□□□□□ -2.29
MMP13P45452 Y_RNA.226-201ENST00000364337 114 ntBASIC0.72□□□□□ -2.29
MMP13P45452 RNU6-382P-201ENST00000365181 106 ntBASIC0.72□□□□□ -2.29
MMP13P45452 RNU6-154P-201ENST00000384306 106 ntBASIC0.72□□□□□ -2.29
MMP13P45452 RNU6-1177P-201ENST00000391058 104 ntBASIC0.72□□□□□ -2.29
MMP13P45452 SNORD42B-201ENST00000458893 67 ntBASIC0.72□□□□□ -2.29
MMP13P45452 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
MMP13P45452 RNU1-29P-201ENST00000606574 126 ntBASIC0.72□□□□□ -2.29
MMP13P45452 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.72□□□□□ -2.29
MMP13P45452 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
MMP13P45452 AL162376.1-201ENST00000624117 175 ntBASIC0.72□□□□□ -2.29
MMP13P45452 U3.27-201ENST00000391237 200 ntBASIC0.71□□□□□ -2.3
MMP13P45452 MIR1287-201ENST00000408492 90 ntBASIC0.71□□□□□ -2.3
MMP13P45452 Y_RNA.606-201ENST00000410579 103 ntBASIC0.71□□□□□ -2.3
MMP13P45452 RNA5SP484-201ENST00000458857 111 ntBASIC0.71□□□□□ -2.3
MMP13P45452 AC097510.1-201ENST00000510945 133 ntBASIC0.71□□□□□ -2.3
MMP13P45452 RNU6-303P-201ENST00000517091 106 ntBASIC0.71□□□□□ -2.3
MMP13P45452 NAMPTP3-201ENST00000569273 224 ntBASIC0.71□□□□□ -2.3
MMP13P45452 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.71□□□□□ -2.3
MMP13P45452 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNY4P3-201ENST00000365254 95 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNU6V-201ENST00000384105 107 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNU2-59P-201ENST00000410482 191 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNA5SP268-201ENST00000516828 124 ntBASIC0.7□□□□□ -2.3
MMP13P45452 RNU6-1057P-201ENST00000517162 102 ntBASIC0.7□□□□□ -2.3
MMP13P45452 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
MMP13P45452 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
MMP13P45452 RNU1-141P-201ENST00000364623 158 ntBASIC0.69□□□□□ -2.3
MMP13P45452 Y_RNA.264-201ENST00000364665 102 ntBASIC0.69□□□□□ -2.3
MMP13P45452 MIR548L-201ENST00000408303 86 ntBASIC0.69□□□□□ -2.3
MMP13P45452 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
MMP13P45452 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
MMP13P45452 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
MMP13P45452 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
MMP13P45452 U7.4-201ENST00000614961 63 ntBASIC0.69□□□□□ -2.3
MMP13P45452 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
MMP13P45452 RNU6-495P-201ENST00000362995 107 ntBASIC0.68□□□□□ -2.3
MMP13P45452 RNU6-1296P-201ENST00000383879 107 ntBASIC0.68□□□□□ -2.3
MMP13P45452 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
MMP13P45452 SNORA8.2-201ENST00000384372 139 ntBASIC0.68□□□□□ -2.3
MMP13P45452 Y_RNA.565-201ENST00000384719 101 ntBASIC0.68□□□□□ -2.3
MMP13P45452 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
MMP13P45452 MT-TY-201ENST00000387409 66 ntBASIC0.68□□□□□ -2.3
MMP13P45452 RNA5SP227-201ENST00000516184 113 ntBASIC0.68□□□□□ -2.3
MMP13P45452 SNORA40.17-201ENST00000517256 115 ntBASIC0.68□□□□□ -2.3
MMP13P45452 AL078603.1-201ENST00000603824 313 ntBASIC0.68□□□□□ -2.3
MMP13P45452 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
MMP13P45452 SNORA25.18-201ENST00000607153 114 ntBASIC0.68□□□□□ -2.3
MMP13P45452 SNORA70.25-201ENST00000612741 95 ntBASIC0.68□□□□□ -2.3
MMP13P45452 MIR4773-1-201ENST00000637203 78 ntBASIC0.68□□□□□ -2.3
MMP13P45452 MIR4662A-201ENST00000637499 67 ntBASIC0.68□□□□□ -2.3
MMP13P45452 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
MMP13P45452 RNU5B-6P-201ENST00000516765 68 ntBASIC0.67□□□□□ -2.3
MMP13P45452 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
MMP13P45452 MIR140-201ENST00000385282 100 ntBASIC0.66□□□□□ -2.3
MMP13P45452 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
MMP13P45452 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
MMP13P45452 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
MMP13P45452 RNU6-1015P-201ENST00000517121 99 ntBASIC0.66□□□□□ -2.3
MMP13P45452 SNORD75.2-201ENST00000408784 58 ntBASIC0.65□□□□□ -2.31
MMP13P45452 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.65□□□□□ -2.31
MMP13P45452 RNU6-687P-201ENST00000516443 89 ntBASIC0.65□□□□□ -2.31
MMP13P45452 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
MMP13P45452 RNU4-45P-201ENST00000365469 141 ntBASIC0.64□□□□□ -2.31
MMP13P45452 SNORA8.1-201ENST00000384250 140 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms