Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNU7-119P-201ENST00000459279 63 ntBASIC1.72□□□□□ -2.13
CHRNA4P43681 U2.7-201ENST00000619197 100 ntBASIC1.72□□□□□ -2.13
CHRNA4P43681 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.71□□□□□ -2.14
CHRNA4P43681 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 AC048334.1-201ENST00000477975 159 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 AC079140.2-201ENST00000506193 142 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 AC023827.1-201ENST00000569247 97 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.71□□□□□ -2.14
CHRNA4P43681 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CHRNA4P43681 SNORD41.1-201ENST00000391000 69 ntBASIC1.7□□□□□ -2.14
CHRNA4P43681 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHRNA4P43681 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHRNA4P43681 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHRNA4P43681 SNORD114-4-201ENST00000363962 75 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 Y_RNA.363-201ENST00000365529 113 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
CHRNA4P43681 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 AC021146.9-201ENST00000512503 156 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 SNORA44.1-201ENST00000517031 108 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 AL157834.3-201ENST00000615543 103 ntBASIC1.69□□□□□ -2.14
CHRNA4P43681 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CHRNA4P43681 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.68□□□□□ -2.14
CHRNA4P43681 MIR3937-201ENST00000580135 106 ntBASIC1.68□□□□□ -2.14
CHRNA4P43681 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CHRNA4P43681 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 RNU6-930P-201ENST00000390938 100 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 RNU6-994P-201ENST00000410507 111 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 TRMT112P2-201ENST00000512910 132 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 MIR4460-201ENST00000577862 86 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 MIR8070-201ENST00000616510 88 ntBASIC1.67□□□□□ -2.14
CHRNA4P43681 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHRNA4P43681 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHRNA4P43681 AL591704.2-201ENST00000421658 181 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 snoU13.13-201ENST00000458842 104 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 RNU7-21P-201ENST00000459430 62 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 SNORA31.2-201ENST00000516019 134 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 RNU6-231P-201ENST00000517122 103 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 AL136317.1-201ENST00000612653 226 ntBASIC1.66□□□□□ -2.14
CHRNA4P43681 RNU4-33P-201ENST00000364316 85 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 SNORA41B-201ENST00000384785 128 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 MIR520F-201ENST00000384824 87 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 MIR100-201ENST00000385259 80 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 Y_RNA.633-201ENST00000459107 95 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 RNU6-135P-201ENST00000516769 101 ntBASIC1.65□□□□□ -2.15
CHRNA4P43681 SNORA15B-2-201ENST00000384058 135 ntBASIC1.64□□□□□ -2.15
CHRNA4P43681 SNORA15B-1-201ENST00000384334 135 ntBASIC1.64□□□□□ -2.15
CHRNA4P43681 MIR548F3-201ENST00000408509 87 ntBASIC1.64□□□□□ -2.15
CHRNA4P43681 snoU13.18-201ENST00000459483 104 ntBASIC1.64□□□□□ -2.15
CHRNA4P43681 MIR4639-201ENST00000584938 69 ntBASIC1.64□□□□□ -2.15
CHRNA4P43681 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.64□□□□□ -2.15
CHRNA4P43681 MIR1-1-201ENST00000362147 71 ntBASIC1.63□□□□□ -2.15
CHRNA4P43681 RNU1-141P-201ENST00000364623 158 ntBASIC1.63□□□□□ -2.15
CHRNA4P43681 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
CHRNA4P43681 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHRNA4P43681 Y_RNA.125-201ENST00000363371 111 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 SNORA33.1-201ENST00000364957 130 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 RNU7-90P-201ENST00000459216 62 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
CHRNA4P43681 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
CHRNA4P43681 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHRNA4P43681 Y_RNA.246-201ENST00000364495 108 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.61□□□□□ -2.15
CHRNA4P43681 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 RN7SKP88-201ENST00000516847 250 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 7SK.8-201ENST00000612110 250 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 7SK.11-201ENST00000615477 250 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.61□□□□□ -2.15
CHRNA4P43681 RMST_2.1-201ENST00000617263 136 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 AC244669.1-204ENST00000621564 178 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 7SK.13-201ENST00000622040 250 ntBASIC1.61□□□□□ -2.15
CHRNA4P43681 SNORD28-201ENST00000384706 75 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 MIR644A-201ENST00000385262 94 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 MIR1827-201ENST00000408549 66 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 SNORA40.16-201ENST00000517238 121 ntBASIC1.6□□□□□ -2.15
CHRNA4P43681 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHRNA4P43681 RNU6-726P-201ENST00000364680 107 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 Y_RNA.325-201ENST00000365171 122 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 MIR489-201ENST00000384923 84 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 MIR758-201ENST00000390227 88 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 AC002350.1-201ENST00000490759 375 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 RNU5B-6P-201ENST00000516765 68 ntBASIC1.59□□□□□ -2.15
CHRNA4P43681 MIR548L-201ENST00000408303 86 ntBASIC1.58□□□□□ -2.16
CHRNA4P43681 SNORD79.1-201ENST00000516069 84 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 337.6 ms