Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU7-13P-201ENST00000516413 62 ntBASIC0.59□□□□□ -2.31
KRT9P35527 RNU6-1057P-201ENST00000517162 102 ntBASIC0.59□□□□□ -2.31
KRT9P35527 MIR4666B-201ENST00000578142 81 ntBASIC0.59□□□□□ -2.31
KRT9P35527 MIR4696-201ENST00000581431 70 ntBASIC0.59□□□□□ -2.31
KRT9P35527 U6.100-201ENST00000636230 99 ntBASIC0.59□□□□□ -2.31
KRT9P35527 Y_RNA.313-201ENST00000365095 103 ntBASIC0.58□□□□□ -2.32
KRT9P35527 SNORD115-44-201ENST00000365391 82 ntBASIC0.58□□□□□ -2.32
KRT9P35527 RNU7-104P-201ENST00000459398 79 ntBASIC0.58□□□□□ -2.32
KRT9P35527 Y_RNA.685-201ENST00000516532 108 ntBASIC0.58□□□□□ -2.32
KRT9P35527 AC140658.3-201ENST00000567603 271 ntBASIC0.58□□□□□ -2.32
KRT9P35527 MIR3678-201ENST00000578455 94 ntBASIC0.58□□□□□ -2.32
KRT9P35527 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
KRT9P35527 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
KRT9P35527 AC067863.3-201ENST00000624172 122 ntBASIC0.58□□□□□ -2.32
KRT9P35527 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRT9P35527 RNA5SP403-201ENST00000363598 108 ntBASIC0.57□□□□□ -2.32
KRT9P35527 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
KRT9P35527 RNY4P3-201ENST00000365254 95 ntBASIC0.57□□□□□ -2.32
KRT9P35527 MIR548L-201ENST00000408303 86 ntBASIC0.57□□□□□ -2.32
KRT9P35527 MIR1255A-201ENST00000408338 113 ntBASIC0.57□□□□□ -2.32
KRT9P35527 RNU6-287P-201ENST00000516230 98 ntBASIC0.57□□□□□ -2.32
KRT9P35527 RNU6-1265P-201ENST00000516342 103 ntBASIC0.57□□□□□ -2.32
KRT9P35527 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
KRT9P35527 MTRNR2L2-201ENST00000604882 87 ntBASIC0.57□□□□□ -2.32
KRT9P35527 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
KRT9P35527 RNU6-228P-201ENST00000362700 106 ntBASIC0.56□□□□□ -2.32
KRT9P35527 Y_RNA.207-201ENST00000364142 106 ntBASIC0.56□□□□□ -2.32
KRT9P35527 Y_RNA.316-201ENST00000365118 111 ntBASIC0.56□□□□□ -2.32
KRT9P35527 SNORD28-201ENST00000384706 75 ntBASIC0.56□□□□□ -2.32
KRT9P35527 RNU7-161P-201ENST00000517289 62 ntBASIC0.56□□□□□ -2.32
KRT9P35527 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.56□□□□□ -2.32
KRT9P35527 AC244669.1-204ENST00000621564 178 ntBASIC0.56□□□□□ -2.32
KRT9P35527 RNU6-624P-201ENST00000363411 107 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNA5SP62-201ENST00000363457 110 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNU6-1051P-201ENST00000365471 102 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNU6-787P-201ENST00000384032 107 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNU6-129P-201ENST00000391022 107 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNU6-380P-201ENST00000410207 107 ntBASIC0.55□□□□□ -2.32
KRT9P35527 RNU6-935P-201ENST00000410371 100 ntBASIC0.55□□□□□ -2.32
KRT9P35527 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
KRT9P35527 RNU7-74P-201ENST00000459104 62 ntBASIC0.55□□□□□ -2.32
KRT9P35527 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.55□□□□□ -2.32
KRT9P35527 AL109933.3-201ENST00000619095 188 ntBASIC0.55□□□□□ -2.32
KRT9P35527 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
KRT9P35527 SNORA63.2-201ENST00000362603 126 ntBASIC0.54□□□□□ -2.32
KRT9P35527 SNORD18A-201ENST00000363753 72 ntBASIC0.54□□□□□ -2.32
KRT9P35527 AL450471.1-201ENST00000447509 127 ntBASIC0.54□□□□□ -2.32
KRT9P35527 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.54□□□□□ -2.32
KRT9P35527 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
KRT9P35527 MIR3920-201ENST00000581751 86 ntBASIC0.54□□□□□ -2.32
KRT9P35527 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
KRT9P35527 RNU5F-1-201ENST00000362507 117 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNU6-161P-201ENST00000363051 106 ntBASIC0.53□□□□□ -2.32
KRT9P35527 Y_RNA.264-201ENST00000364665 102 ntBASIC0.53□□□□□ -2.32
KRT9P35527 MIR451A-201ENST00000385059 72 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNU6-1275P-201ENST00000391087 107 ntBASIC0.53□□□□□ -2.32
KRT9P35527 U3.27-201ENST00000391237 200 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNU6-1052P-201ENST00000411398 104 ntBASIC0.53□□□□□ -2.32
KRT9P35527 MIR2113-201ENST00000459007 91 ntBASIC0.53□□□□□ -2.32
KRT9P35527 FGF7P7-201ENST00000514120 227 ntBASIC0.53□□□□□ -2.32
KRT9P35527 Y_RNA.660-201ENST00000516002 120 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNU6-719P-201ENST00000516671 104 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNA5SP47-201ENST00000517230 109 ntBASIC0.53□□□□□ -2.32
KRT9P35527 MIR8087-201ENST00000612745 78 ntBASIC0.53□□□□□ -2.32
KRT9P35527 RNU6-208P-201ENST00000362431 107 ntBASIC0.52□□□□□ -2.33
KRT9P35527 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
KRT9P35527 RNU6-686P-201ENST00000364839 107 ntBASIC0.52□□□□□ -2.33
KRT9P35527 RNU6-1126P-201ENST00000384002 107 ntBASIC0.52□□□□□ -2.33
KRT9P35527 MIR617-201ENST00000385030 97 ntBASIC0.52□□□□□ -2.33
KRT9P35527 MIR216B-201ENST00000390186 82 ntBASIC0.52□□□□□ -2.33
KRT9P35527 SNORD77.2-201ENST00000391045 68 ntBASIC0.52□□□□□ -2.33
KRT9P35527 RNU6-1108P-201ENST00000516308 104 ntBASIC0.52□□□□□ -2.33
KRT9P35527 RNU6-557P-201ENST00000516842 110 ntBASIC0.52□□□□□ -2.33
KRT9P35527 SCARNA16.5-201ENST00000517114 183 ntBASIC0.52□□□□□ -2.33
KRT9P35527 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
KRT9P35527 AC010487.4-201ENST00000637027 61 ntBASIC0.52□□□□□ -2.33
KRT9P35527 MIR924-201ENST00000638017 53 ntBASIC0.52□□□□□ -2.33
KRT9P35527 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
KRT9P35527 RNU6-1094P-201ENST00000362416 104 ntBASIC0.51□□□□□ -2.33
KRT9P35527 RNU6-315P-201ENST00000362666 107 ntBASIC0.51□□□□□ -2.33
KRT9P35527 RNU6-24P-201ENST00000384440 107 ntBASIC0.51□□□□□ -2.33
KRT9P35527 SNORD90-201ENST00000391145 111 ntBASIC0.51□□□□□ -2.33
KRT9P35527 RNA5SP225-201ENST00000410874 135 ntBASIC0.51□□□□□ -2.33
KRT9P35527 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.51□□□□□ -2.33
KRT9P35527 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
KRT9P35527 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
KRT9P35527 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
KRT9P35527 MIR3140-201ENST00000583685 90 ntBASIC0.51□□□□□ -2.33
KRT9P35527 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
KRT9P35527 RNU6-726P-201ENST00000364680 107 ntBASIC0.5□□□□□ -2.33
KRT9P35527 SNORD41.1-201ENST00000391000 69 ntBASIC0.5□□□□□ -2.33
KRT9P35527 RNU6-279P-201ENST00000391297 101 ntBASIC0.5□□□□□ -2.33
KRT9P35527 RNU6-638P-201ENST00000516582 104 ntBASIC0.5□□□□□ -2.33
KRT9P35527 MIR548AG2-201ENST00000581228 64 ntBASIC0.5□□□□□ -2.33
KRT9P35527 Y_RNA.94-201ENST00000363068 106 ntBASIC0.49□□□□□ -2.33
KRT9P35527 RNU6-478P-201ENST00000363904 110 ntBASIC0.49□□□□□ -2.33
KRT9P35527 MIR519E-201ENST00000385075 84 ntBASIC0.49□□□□□ -2.33
KRT9P35527 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
KRT9P35527 snoU13.17-201ENST00000458802 104 ntBASIC0.49□□□□□ -2.33
KRT9P35527 RNU6-857P-201ENST00000515893 110 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms