Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-54P-201ENST00000365563 107 ntBASIC-1.26□□□□□ -2.61
COL4A5P29400 RNY3P14-201ENST00000384309 102 ntBASIC-1.26□□□□□ -2.61
COL4A5P29400 MIR548G-201ENST00000408442 89 ntBASIC-1.26□□□□□ -2.61
COL4A5P29400 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.26□□□□□ -2.61
COL4A5P29400 MTND1P19-201ENST00000511780 315 ntBASIC-1.26□□□□□ -2.61
COL4A5P29400 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.26□□□□□ -2.61
COL4A5P29400 AC113195.1-201ENST00000579952 141 ntBASIC-1.26□□□□□ -2.61
COL4A5P29400 SNORD115-19-201ENST00000363098 82 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 SNORD115-18-201ENST00000363293 82 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 SNORD115-17-201ENST00000364612 82 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 SNORD42.2-201ENST00000365570 69 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 MIR507-201ENST00000385234 94 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 RNU6-935P-201ENST00000410371 100 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 AC018880.2-201ENST00000414265 201 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 MIR4756-201ENST00000577874 78 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 MIR3163-201ENST00000581592 73 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 U6.104-201ENST00000637979 90 ntBASIC-1.27□□□□□ -2.61
COL4A5P29400 SNORD115-22-201ENST00000364456 82 ntBASIC-1.28□□□□□ -2.61
COL4A5P29400 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.28□□□□□ -2.61
COL4A5P29400 RNU6-493P-201ENST00000391321 108 ntBASIC-1.28□□□□□ -2.61
COL4A5P29400 MIR1302-6-201ENST00000408466 90 ntBASIC-1.28□□□□□ -2.61
COL4A5P29400 RNU6-79P-201ENST00000362511 107 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 RNU6-713P-201ENST00000384761 107 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 MIR451A-201ENST00000385059 72 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 SNORA75.5-201ENST00000391291 81 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 SNORD42B-201ENST00000458893 67 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 RNU6-65P-201ENST00000516332 98 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 MIR4464-201ENST00000580818 92 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 MIR487B-201ENST00000385021 84 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 RNU6-168P-201ENST00000516189 101 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 MIR664B-201ENST00000626756 61 ntBASIC-1.29□□□□□ -2.62
COL4A5P29400 RNU6-275P-201ENST00000364910 107 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 RNU6-80P-201ENST00000384195 107 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 AP002795.1-201ENST00000534879 84 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 MIR4643-201ENST00000577473 78 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 U6.96-201ENST00000636425 70 ntBASIC-1.3□□□□□ -2.62
COL4A5P29400 RNU6-363P-201ENST00000362895 105 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 RNU6-495P-201ENST00000362995 107 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 MIR582-201ENST00000365731 98 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 RNU6-409P-201ENST00000384114 104 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 RNU6-695P-201ENST00000391157 104 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 AL442128.1-201ENST00000615151 90 ntBASIC-1.31□□□□□ -2.62
COL4A5P29400 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
COL4A5P29400 SNORA7.5-201ENST00000410672 110 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 AC090616.4-201ENST00000448026 115 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 U2.14-201ENST00000615943 113 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 U6.106-201ENST00000636360 105 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 RNU6-980P-201ENST00000516925 103 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 MIR3121-201ENST00000579680 77 ntBASIC-1.32□□□□□ -2.62
COL4A5P29400 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.33□□□□□ -2.62
COL4A5P29400 AL353691.2-201ENST00000443795 59 ntBASIC-1.33□□□□□ -2.62
COL4A5P29400 MIR4795-201ENST00000584182 89 ntBASIC-1.33□□□□□ -2.62
COL4A5P29400 MIR1255B1-201ENST00000636325 63 ntBASIC-1.33□□□□□ -2.62
COL4A5P29400 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 RNU6-508P-201ENST00000363231 103 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 MTND5P20-201ENST00000448677 143 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 MIR3149-201ENST00000584629 83 ntBASIC-1.34□□□□□ -2.62
COL4A5P29400 SNORA63.6-201ENST00000364921 119 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.35□□□□□ -2.63
COL4A5P29400 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 CYP3A54P-201ENST00000566950 75 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 AC108081.1-201ENST00000604358 221 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 AC090617.8-201ENST00000623339 167 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 AC139792.2-201ENST00000624218 587 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNY1P11-201ENST00000363759 113 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNA5SP136-201ENST00000410906 107 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNU7-24P-201ENST00000458867 62 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNU6-118P-201ENST00000516552 102 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 MIR3139-201ENST00000579145 76 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 AC134503.1-201ENST00000633048 54 ntBASIC-1.35□□□□□ -2.63
COL4A5P29400 RNA5SP405-201ENST00000363059 114 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 RNU6-474P-201ENST00000384243 107 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 MT-TD-201ENST00000387419 68 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 RNU6-985P-201ENST00000410182 104 ntBASIC-1.36□□□□□ -2.63
COL4A5P29400 RNU6-647P-201ENST00000364243 107 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 RNU6-400P-201ENST00000391173 106 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 SNORD19-201ENST00000391191 68 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.37□□□□□ -2.63
COL4A5P29400 RNU6-75P-201ENST00000515944 104 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms