Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR19B1-201ENST00000384829 87 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 SNORD41.1-201ENST00000391000 69 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 RNU4-62P-201ENST00000410125 130 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 RNU7-74P-201ENST00000459104 62 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 AC244669.1-204ENST00000621564 178 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
NFKB1P19838 NAMPTP3-201ENST00000569273 224 ntBASIC1.48□□□□□ -2.17
NFKB1P19838 RNU6-1216P-201ENST00000362590 107 ntBASIC1.47□□□□□ -2.17
NFKB1P19838 RNU6-54P-201ENST00000365563 107 ntBASIC1.47□□□□□ -2.17
NFKB1P19838 RNU6-1039P-201ENST00000383931 107 ntBASIC1.47□□□□□ -2.17
NFKB1P19838 SNORD116-24-201ENST00000384549 92 ntBASIC1.47□□□□□ -2.17
NFKB1P19838 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
NFKB1P19838 MIR7-2-201ENST00000384970 110 ntBASIC1.46□□□□□ -2.18
NFKB1P19838 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
NFKB1P19838 SNORD18A-201ENST00000363753 72 ntBASIC1.45□□□□□ -2.18
NFKB1P19838 AC093423.1-201ENST00000440817 142 ntBASIC1.45□□□□□ -2.18
NFKB1P19838 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
NFKB1P19838 RNA5SP47-201ENST00000517230 109 ntBASIC1.45□□□□□ -2.18
NFKB1P19838 MIR6509-201ENST00000614603 85 ntBASIC1.45□□□□□ -2.18
NFKB1P19838 MIR200A-201ENST00000384875 90 ntBASIC1.44□□□□□ -2.18
NFKB1P19838 MIR573-201ENST00000384964 99 ntBASIC1.44□□□□□ -2.18
NFKB1P19838 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
NFKB1P19838 RNU6-726P-201ENST00000364680 107 ntBASIC1.43□□□□□ -2.18
NFKB1P19838 RNU6V-201ENST00000384105 107 ntBASIC1.43□□□□□ -2.18
NFKB1P19838 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
NFKB1P19838 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
NFKB1P19838 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NFKB1P19838 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
NFKB1P19838 MIR548L-201ENST00000408303 86 ntBASIC1.42□□□□□ -2.18
NFKB1P19838 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
NFKB1P19838 SNORD124-201ENST00000459577 104 ntBASIC1.42□□□□□ -2.18
NFKB1P19838 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
NFKB1P19838 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
NFKB1P19838 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.41□□□□□ -2.18
NFKB1P19838 MIR3678-201ENST00000578455 94 ntBASIC1.41□□□□□ -2.18
NFKB1P19838 MIR3612-201ENST00000579753 87 ntBASIC1.41□□□□□ -2.18
NFKB1P19838 MIR6734-201ENST00000621166 68 ntBASIC1.41□□□□□ -2.18
NFKB1P19838 MT-TY-201ENST00000387409 66 ntBASIC1.4□□□□□ -2.19
NFKB1P19838 SNORD42B-201ENST00000458893 67 ntBASIC1.4□□□□□ -2.19
NFKB1P19838 AC073869.9-201ENST00000641610 120 ntBASIC1.4□□□□□ -2.19
NFKB1P19838 MIR203A-201ENST00000384836 110 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 RNU6-982P-201ENST00000516216 102 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 SCARNA16.5-201ENST00000517114 183 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 MIR4460-201ENST00000577862 86 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 AC025627.3-201ENST00000582078 182 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 MIR3657-201ENST00000584818 117 ntBASIC1.39□□□□□ -2.19
NFKB1P19838 RNU6-1335P-201ENST00000365426 107 ntBASIC1.38□□□□□ -2.19
NFKB1P19838 RNU6-716P-201ENST00000365621 103 ntBASIC1.38□□□□□ -2.19
NFKB1P19838 MIR4511-201ENST00000582784 87 ntBASIC1.38□□□□□ -2.19
NFKB1P19838 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
NFKB1P19838 AC103706.3-201ENST00000636297 85 ntBASIC1.38□□□□□ -2.19
NFKB1P19838 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NFKB1P19838 RNU1-141P-201ENST00000364623 158 ntBASIC1.37□□□□□ -2.19
NFKB1P19838 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
NFKB1P19838 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.36□□□□□ -2.19
NFKB1P19838 RNU1-124P-201ENST00000363861 145 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 SNORD114-24-201ENST00000365029 72 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 RNU6-260P-201ENST00000384092 107 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 SNORA8.2-201ENST00000384372 139 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 RNU6-269P-201ENST00000391077 97 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 MTND4LP1-201ENST00000446263 157 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 RNA5SP255-201ENST00000516370 107 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
NFKB1P19838 RNA5SP325-201ENST00000363756 130 ntBASIC1.34□□□□□ -2.19
NFKB1P19838 MIR9-2-201ENST00000384838 87 ntBASIC1.34□□□□□ -2.19
NFKB1P19838 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
NFKB1P19838 AL109933.3-201ENST00000619095 188 ntBASIC1.34□□□□□ -2.19
NFKB1P19838 MIR6828-201ENST00000636181 60 ntBASIC1.34□□□□□ -2.19
NFKB1P19838 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
NFKB1P19838 SNORA2.1-201ENST00000363089 137 ntBASIC1.33□□□□□ -2.2
NFKB1P19838 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
NFKB1P19838 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
NFKB1P19838 RNU6-668P-201ENST00000364180 107 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 RNU6-1187P-201ENST00000364771 110 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NFKB1P19838 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 SNORA40.17-201ENST00000517256 115 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 AL162376.1-201ENST00000624117 175 ntBASIC1.32□□□□□ -2.2
NFKB1P19838 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
NFKB1P19838 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
NFKB1P19838 RNU6-42P-201ENST00000384165 107 ntBASIC1.31□□□□□ -2.2
NFKB1P19838 RNA5SP484-201ENST00000458857 111 ntBASIC1.31□□□□□ -2.2
NFKB1P19838 AC069503.3-201ENST00000618674 145 ntBASIC1.31□□□□□ -2.2
NFKB1P19838 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
NFKB1P19838 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
NFKB1P19838 RNU6-990P-201ENST00000364385 104 ntBASIC1.3□□□□□ -2.2
NFKB1P19838 RNU6-645P-201ENST00000364649 106 ntBASIC1.3□□□□□ -2.2
NFKB1P19838 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
NFKB1P19838 RNA5SP480-201ENST00000516840 109 ntBASIC1.3□□□□□ -2.2
NFKB1P19838 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NFKB1P19838 MIR18A-201ENST00000362310 71 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 SNORD114-4-201ENST00000363962 75 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 SNORD99-201ENST00000408612 74 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms