Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 MIR200A-201ENST00000384875 90 ntBASIC2.16□□□□□ -2.06
CHGAP10645 RNU6-663P-201ENST00000391105 106 ntBASIC2.16□□□□□ -2.06
CHGAP10645 MIR1304-201ENST00000408243 91 ntBASIC2.16□□□□□ -2.06
CHGAP10645 SNORD75.2-201ENST00000408784 58 ntBASIC2.16□□□□□ -2.06
CHGAP10645 RNU7-24P-201ENST00000458867 62 ntBASIC2.16□□□□□ -2.06
CHGAP10645 SNORD28-201ENST00000384706 75 ntBASIC2.15□□□□□ -2.07
CHGAP10645 MIR519E-201ENST00000385075 84 ntBASIC2.15□□□□□ -2.07
CHGAP10645 MIR6515-201ENST00000619843 57 ntBASIC2.15□□□□□ -2.07
CHGAP10645 U6.111-201ENST00000636093 83 ntBASIC2.15□□□□□ -2.07
CHGAP10645 AC244098.3-201ENST00000424803 96 ntBASIC2.14□□□□□ -2.07
CHGAP10645 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
CHGAP10645 MIR548O2-201ENST00000616090 70 ntBASIC2.14□□□□□ -2.07
CHGAP10645 PVT1_3.1-201ENST00000620853 95 ntBASIC2.14□□□□□ -2.07
CHGAP10645 RNU6-895P-201ENST00000384125 103 ntBASIC2.13□□□□□ -2.07
CHGAP10645 AL353770.2-201ENST00000620024 78 ntBASIC2.13□□□□□ -2.07
CHGAP10645 AC244669.1-204ENST00000621564 178 ntBASIC2.13□□□□□ -2.07
CHGAP10645 SNORD41.1-201ENST00000391000 69 ntBASIC2.12□□□□□ -2.07
CHGAP10645 RNU6-495P-201ENST00000362995 107 ntBASIC2.11□□□□□ -2.07
CHGAP10645 Y_RNA.340-201ENST00000365330 92 ntBASIC2.11□□□□□ -2.07
CHGAP10645 RNU6-800P-201ENST00000384473 103 ntBASIC2.11□□□□□ -2.07
CHGAP10645 AL691482.2-201ENST00000457453 84 ntBASIC2.11□□□□□ -2.07
CHGAP10645 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.11□□□□□ -2.07
CHGAP10645 Y_RNA.374-201ENST00000365606 101 ntBASIC2.1□□□□□ -2.07
CHGAP10645 Y_RNA.386-201ENST00000383913 105 ntBASIC2.1□□□□□ -2.07
CHGAP10645 MIR96-201ENST00000362288 78 ntBASIC2.09□□□□□ -2.07
CHGAP10645 SNORD115-22-201ENST00000364456 82 ntBASIC2.09□□□□□ -2.07
CHGAP10645 SNORD26-201ENST00000384147 75 ntBASIC2.09□□□□□ -2.07
CHGAP10645 AC025627.3-201ENST00000582078 182 ntBASIC2.09□□□□□ -2.07
CHGAP10645 SNORD45A-201ENST00000384512 84 ntBASIC2.08□□□□□ -2.08
CHGAP10645 SNORD18A-201ENST00000363753 72 ntBASIC2.07□□□□□ -2.08
CHGAP10645 MIR573-201ENST00000384964 99 ntBASIC2.07□□□□□ -2.08
CHGAP10645 RNU6-881P-201ENST00000516813 102 ntBASIC2.07□□□□□ -2.08
CHGAP10645 MIR548L-201ENST00000408303 86 ntBASIC2.06□□□□□ -2.08
CHGAP10645 RNA5SP47-201ENST00000517230 109 ntBASIC2.06□□□□□ -2.08
CHGAP10645 RNU6-604P-201ENST00000390917 100 ntBASIC2.05□□□□□ -2.08
CHGAP10645 SNORD124-201ENST00000459577 104 ntBASIC2.05□□□□□ -2.08
CHGAP10645 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHGAP10645 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHGAP10645 RNU6-1039P-201ENST00000383931 107 ntBASIC2.04□□□□□ -2.08
CHGAP10645 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
CHGAP10645 MIR3678-201ENST00000578455 94 ntBASIC2.04□□□□□ -2.08
CHGAP10645 MIR3612-201ENST00000579753 87 ntBASIC2.04□□□□□ -2.08
CHGAP10645 MIR6078-201ENST00000611069 100 ntBASIC2.04□□□□□ -2.08
CHGAP10645 RNU6-726P-201ENST00000364680 107 ntBASIC2.03□□□□□ -2.08
CHGAP10645 RNA5SP363-201ENST00000365072 115 ntBASIC2.03□□□□□ -2.08
CHGAP10645 MIR1265-201ENST00000408444 86 ntBASIC2.03□□□□□ -2.08
CHGAP10645 SNORD114-24-201ENST00000365029 72 ntBASIC2.02□□□□□ -2.09
CHGAP10645 AC093423.1-201ENST00000440817 142 ntBASIC2.02□□□□□ -2.09
CHGAP10645 NAMPTP3-201ENST00000569273 224 ntBASIC2.02□□□□□ -2.09
CHGAP10645 RNU6-1216P-201ENST00000362590 107 ntBASIC2.01□□□□□ -2.09
CHGAP10645 SNORD113.1-201ENST00000363280 73 ntBASIC2.01□□□□□ -2.09
CHGAP10645 Y_RNA.205-201ENST00000364128 113 ntBASIC2.01□□□□□ -2.09
CHGAP10645 MIR6509-201ENST00000614603 85 ntBASIC2□□□□□ -2.09
CHGAP10645 RNU1-124P-201ENST00000363861 145 ntBASIC1.99□□□□□ -2.09
CHGAP10645 RNU6-54P-201ENST00000365563 107 ntBASIC1.99□□□□□ -2.09
CHGAP10645 RNU6-471P-201ENST00000383944 106 ntBASIC1.99□□□□□ -2.09
CHGAP10645 RNU6V-201ENST00000384105 107 ntBASIC1.99□□□□□ -2.09
CHGAP10645 MIR598-201ENST00000384868 97 ntBASIC1.99□□□□□ -2.09
CHGAP10645 RNU6-630P-201ENST00000391258 106 ntBASIC1.99□□□□□ -2.09
CHGAP10645 SCARNA16.5-201ENST00000517114 183 ntBASIC1.99□□□□□ -2.09
CHGAP10645 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.99□□□□□ -2.09
CHGAP10645 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHGAP10645 RNU1-93P-201ENST00000364704 169 ntBASIC1.98□□□□□ -2.09
CHGAP10645 MT-TY-201ENST00000387409 66 ntBASIC1.98□□□□□ -2.09
CHGAP10645 RPS29P23-201ENST00000458635 123 ntBASIC1.98□□□□□ -2.09
CHGAP10645 AC005520.4-201ENST00000604337 90 ntBASIC1.98□□□□□ -2.09
CHGAP10645 SNORA25.8-201ENST00000364831 128 ntBASIC1.97□□□□□ -2.09
CHGAP10645 MIR520E-201ENST00000384867 87 ntBASIC1.97□□□□□ -2.09
CHGAP10645 RNA5SP255-201ENST00000516370 107 ntBASIC1.97□□□□□ -2.09
CHGAP10645 RNA5SP404-201ENST00000517118 132 ntBASIC1.97□□□□□ -2.09
CHGAP10645 MIR4460-201ENST00000577862 86 ntBASIC1.97□□□□□ -2.09
CHGAP10645 RNU6-1335P-201ENST00000365426 107 ntBASIC1.96□□□□□ -2.1
CHGAP10645 Y_RNA.443-201ENST00000384135 111 ntBASIC1.96□□□□□ -2.1
CHGAP10645 RPS29P1-201ENST00000465274 159 ntBASIC1.96□□□□□ -2.1
CHGAP10645 SNORA25.4-201ENST00000363666 124 ntBASIC1.95□□□□□ -2.1
CHGAP10645 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHGAP10645 SNORD114-27-201ENST00000363766 70 ntBASIC1.94□□□□□ -2.1
CHGAP10645 RNU1-141P-201ENST00000364623 158 ntBASIC1.94□□□□□ -2.1
CHGAP10645 RNU6-716P-201ENST00000365621 103 ntBASIC1.94□□□□□ -2.1
CHGAP10645 MIR618-201ENST00000385287 98 ntBASIC1.94□□□□□ -2.1
CHGAP10645 SNORA8.2-201ENST00000384372 139 ntBASIC1.93□□□□□ -2.1
CHGAP10645 SNORD116-24-201ENST00000384549 92 ntBASIC1.93□□□□□ -2.1
CHGAP10645 MIR320A-201ENST00000385302 82 ntBASIC1.93□□□□□ -2.1
CHGAP10645 RNU6-1223P-201ENST00000517124 104 ntBASIC1.93□□□□□ -2.1
CHGAP10645 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHGAP10645 RNU4-45P-201ENST00000365469 141 ntBASIC1.92□□□□□ -2.1
CHGAP10645 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.92□□□□□ -2.1
CHGAP10645 SNORD42B-201ENST00000458893 67 ntBASIC1.91□□□□□ -2.1
CHGAP10645 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.91□□□□□ -2.1
CHGAP10645 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.91□□□□□ -2.1
CHGAP10645 MIR6828-201ENST00000636181 60 ntBASIC1.91□□□□□ -2.1
CHGAP10645 MIR26B-201ENST00000362251 77 ntBASIC1.9□□□□□ -2.11
CHGAP10645 RNU6-260P-201ENST00000384092 107 ntBASIC1.9□□□□□ -2.11
CHGAP10645 RNU6-269P-201ENST00000391077 97 ntBASIC1.9□□□□□ -2.11
CHGAP10645 AC073869.9-201ENST00000641610 120 ntBASIC1.9□□□□□ -2.11
CHGAP10645 SNORA40.6-201ENST00000391153 128 ntBASIC1.89□□□□□ -2.11
CHGAP10645 MIR3657-201ENST00000584818 117 ntBASIC1.89□□□□□ -2.11
CHGAP10645 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHGAP10645 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHGAP10645 MIR203A-201ENST00000384836 110 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms