Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
RTN3O95197 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.35□□□□□ -2.47
RTN3O95197 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
RTN3O95197 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
RTN3O95197 RNU6-664P-201ENST00000362381 107 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 SNORD114-11-201ENST00000363738 75 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 SNORD50.2-201ENST00000365465 70 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 MIR548A3-201ENST00000385297 97 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 SNORD33.1-201ENST00000516213 88 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 RNU6-659P-201ENST00000516454 104 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
RTN3O95197 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 SNORD114-29-201ENST00000364819 70 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 MIR548A1-201ENST00000385041 97 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 MIR4696-201ENST00000581431 70 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
RTN3O95197 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.38□□□□□ -2.47
RTN3O95197 RNU6-154P-201ENST00000384306 106 ntBASIC-0.38□□□□□ -2.47
RTN3O95197 MIR5009-201ENST00000578736 100 ntBASIC-0.38□□□□□ -2.47
RTN3O95197 MIR4439-201ENST00000583746 80 ntBASIC-0.38□□□□□ -2.47
RTN3O95197 MIR4788-201ENST00000639104 80 ntBASIC-0.38□□□□□ -2.47
RTN3O95197 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.39□□□□□ -2.47
RTN3O95197 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.39□□□□□ -2.47
RTN3O95197 RNU6-935P-201ENST00000410371 100 ntBASIC-0.39□□□□□ -2.47
RTN3O95197 AC096531.1-201ENST00000419107 107 ntBASIC-0.39□□□□□ -2.47
RTN3O95197 RNU6-86P-201ENST00000606534 107 ntBASIC-0.39□□□□□ -2.47
RTN3O95197 SNORD45B-201ENST00000364617 72 ntBASIC-0.4□□□□□ -2.47
RTN3O95197 AC025521.1-201ENST00000621624 286 ntBASIC-0.4□□□□□ -2.47
RTN3O95197 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.41□□□□□ -2.48
RTN3O95197 MIR652-201ENST00000385278 98 ntBASIC-0.41□□□□□ -2.48
RTN3O95197 MIR3133-201ENST00000583157 78 ntBASIC-0.41□□□□□ -2.48
RTN3O95197 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.41□□□□□ -2.48
RTN3O95197 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
RTN3O95197 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
RTN3O95197 SNORA49-201ENST00000386157 136 ntBASIC-0.42□□□□□ -2.48
RTN3O95197 AC145423.2-201ENST00000610631 239 ntBASIC-0.42□□□□□ -2.48
RTN3O95197 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 SNORD116-14-201ENST00000383894 92 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 SNORD116-17-201ENST00000383929 92 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 SNORD116-15-201ENST00000384445 92 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 SNORD116-19-201ENST00000384729 92 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 MIR9-2-201ENST00000384838 87 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
RTN3O95197 AC097510.1-201ENST00000510945 133 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 RNU6-65P-201ENST00000516332 98 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 RNA5SP169-201ENST00000517268 117 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 MIR548AZ-201ENST00000616567 95 ntBASIC-0.43□□□□□ -2.48
RTN3O95197 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 RNU6-704P-201ENST00000364162 103 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 RNU6-455P-201ENST00000384681 107 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 MIR1468-201ENST00000410600 86 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 RNU4-63P-201ENST00000411313 118 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 RNY1P9-201ENST00000532431 109 ntBASIC-0.44□□□□□ -2.48
RTN3O95197 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 RNU6-746P-201ENST00000384112 109 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 RNU6-75P-201ENST00000515944 104 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 RNU6-762P-201ENST00000517107 102 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 AP000676.1-201ENST00000533307 52 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 MIR3613-201ENST00000579844 87 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 MIR4536-1-201ENST00000583537 88 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 MIR548O2-201ENST00000616090 70 ntBASIC-0.45□□□□□ -2.48
RTN3O95197 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 MIR582-201ENST00000365731 98 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 MT-TQ-201ENST00000387372 72 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 SNX3P1X-201ENST00000414887 175 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 SNORD57-201ENST00000448188 72 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 AC114755.3-201ENST00000481111 251 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 AL513043.2-201ENST00000573941 143 ntBASIC-0.46□□□□□ -2.48
RTN3O95197 MIR20A-201ENST00000362279 71 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU4-36P-201ENST00000364294 144 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU6-54P-201ENST00000365563 107 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU6-880P-201ENST00000384526 107 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 SNORD56B-201ENST00000384713 71 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 MIR451A-201ENST00000385059 72 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU6-412P-201ENST00000516434 106 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
RTN3O95197 RNU6-774P-201ENST00000363238 107 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 SNORD14C-201ENST00000365382 88 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 U3.27-201ENST00000391237 200 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 RNU6-284P-201ENST00000411105 106 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 AL445193.1-201ENST00000441183 141 ntBASIC-0.48□□□□□ -2.49
RTN3O95197 RNU6-813P-201ENST00000384691 107 ntBASIC-0.49□□□□□ -2.49
RTN3O95197 SNORD42B-201ENST00000458893 67 ntBASIC-0.49□□□□□ -2.49
RTN3O95197 MIR4280-201ENST00000582178 76 ntBASIC-0.49□□□□□ -2.49
RTN3O95197 MIR4723-201ENST00000585070 81 ntBASIC-0.49□□□□□ -2.49
RTN3O95197 MIR4436A-201ENST00000585278 85 ntBASIC-0.49□□□□□ -2.49
RTN3O95197 SNORD75.1-201ENST00000408373 60 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms