Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RNU6-111P-201ENST00000517179 105 ntBASIC-1.59□□□□□ -2.66
RNF13O43567 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 SNORD115-23-201ENST00000364461 82 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 RNU6-915P-201ENST00000364943 103 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 MIRLET7B-201ENST00000385140 83 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 MIR1263-201ENST00000408324 86 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 AC072026.1-201ENST00000605023 201 ntBASIC-1.6□□□□□ -2.67
RNF13O43567 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 RNU6-65P-201ENST00000516332 98 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 snoU83B.1-201ENST00000517136 88 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 AC022559.1-201ENST00000520905 205 ntBASIC-1.61□□□□□ -2.67
RNF13O43567 RNU4-11P-201ENST00000365287 132 ntBASIC-1.62□□□□□ -2.67
RNF13O43567 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.62□□□□□ -2.67
RNF13O43567 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.62□□□□□ -2.67
RNF13O43567 RNU6-905P-201ENST00000384434 107 ntBASIC-1.62□□□□□ -2.67
RNF13O43567 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.62□□□□□ -2.67
RNF13O43567 SNORA20.1-201ENST00000364790 130 ntBASIC-1.63□□□□□ -2.67
RNF13O43567 RNU6-867P-201ENST00000364956 107 ntBASIC-1.63□□□□□ -2.67
RNF13O43567 MIR4536-1-201ENST00000583537 88 ntBASIC-1.63□□□□□ -2.67
RNF13O43567 RNY4P6-201ENST00000363667 96 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 RNU6-460P-201ENST00000391158 108 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 FGF7P7-201ENST00000514120 227 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 RNA5SP461-201ENST00000516451 104 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 AC008737.2-201ENST00000599446 118 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 AL627230.5-201ENST00000619807 58 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 MIR198-201ENST00000637333 62 ntBASIC-1.64□□□□□ -2.67
RNF13O43567 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.65□□□□□ -2.67
RNF13O43567 RNU6-337P-201ENST00000391243 106 ntBASIC-1.65□□□□□ -2.67
RNF13O43567 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.65□□□□□ -2.67
RNF13O43567 AC062037.2-201ENST00000610137 73 ntBASIC-1.65□□□□□ -2.67
RNF13O43567 RNU6-797P-201ENST00000363101 109 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 SNORA62.4-201ENST00000365504 151 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 MIR606-201ENST00000384851 96 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 MIR601-201ENST00000385256 79 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 RNU6-816P-201ENST00000390914 107 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.66□□□□□ -2.68
RNF13O43567 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 SNORD50.2-201ENST00000365465 70 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 MIR1302-3-201ENST00000408128 138 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 RNU6-719P-201ENST00000516671 104 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 AC025521.1-201ENST00000621624 286 ntBASIC-1.67□□□□□ -2.68
RNF13O43567 RNU6-495P-201ENST00000362995 107 ntBASIC-1.68□□□□□ -2.68
RNF13O43567 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.68□□□□□ -2.68
RNF13O43567 AC138207.3-201ENST00000585289 166 ntBASIC-1.68□□□□□ -2.68
RNF13O43567 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.68□□□□□ -2.68
RNF13O43567 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 SNORA63.2-201ENST00000362603 126 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 MTCYBP9-201ENST00000431021 303 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 AP001340.1-201ENST00000624405 217 ntBASIC-1.69□□□□□ -2.68
RNF13O43567 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.7□□□□□ -2.68
RNF13O43567 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.7□□□□□ -2.68
RNF13O43567 MIR124-2-201ENST00000385081 109 ntBASIC-1.7□□□□□ -2.68
RNF13O43567 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.7□□□□□ -2.68
RNF13O43567 YWHAEP3-201ENST00000582767 121 ntBASIC-1.7□□□□□ -2.68
RNF13O43567 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 SNORD114-17-201ENST00000364699 75 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 MIR1285-2-201ENST00000408311 88 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 AC141273.2-201ENST00000618989 130 ntBASIC-1.71□□□□□ -2.68
RNF13O43567 AL158147.1-201ENST00000443970 75 ntBASIC-1.72□□□□□ -2.68
RNF13O43567 RNU7-85P-201ENST00000458851 63 ntBASIC-1.72□□□□□ -2.68
RNF13O43567 SNORA81.3-201ENST00000517283 198 ntBASIC-1.72□□□□□ -2.68
RNF13O43567 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.72□□□□□ -2.68
RNF13O43567 MIR548U-201ENST00000390728 81 ntBASIC-1.73□□□□□ -2.69
RNF13O43567 MIR513C-201ENST00000401352 84 ntBASIC-1.73□□□□□ -2.69
RNF13O43567 AL117351.2-201ENST00000513571 157 ntBASIC-1.73□□□□□ -2.69
RNF13O43567 AP001094.1-201ENST00000579805 193 ntBASIC-1.73□□□□□ -2.69
RNF13O43567 RNU6-151P-201ENST00000364158 107 ntBASIC-1.74□□□□□ -2.69
RNF13O43567 RNU7-24P-201ENST00000458867 62 ntBASIC-1.74□□□□□ -2.69
RNF13O43567 AC021146.9-201ENST00000512503 156 ntBASIC-1.74□□□□□ -2.69
RNF13O43567 RNU6-781P-201ENST00000516377 101 ntBASIC-1.74□□□□□ -2.69
RNF13O43567 RNU6-208P-201ENST00000362431 107 ntBASIC-1.75□□□□□ -2.69
RNF13O43567 RNU6-738P-201ENST00000384531 106 ntBASIC-1.75□□□□□ -2.69
RNF13O43567 MIR577-201ENST00000385196 96 ntBASIC-1.75□□□□□ -2.69
RNF13O43567 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
RNF13O43567 MIR4694-201ENST00000578534 80 ntBASIC-1.75□□□□□ -2.69
RNF13O43567 U6.96-201ENST00000636425 70 ntBASIC-1.75□□□□□ -2.69
RNF13O43567 MIR365A-201ENST00000362260 87 ntBASIC-1.76□□□□□ -2.69
RNF13O43567 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.76□□□□□ -2.69
RNF13O43567 HLA-S-202ENST00000425174 53 ntBASIC-1.76□□□□□ -2.69
RNF13O43567 RNA5SP180-201ENST00000516181 101 ntBASIC-1.76□□□□□ -2.69
RNF13O43567 AL513043.2-201ENST00000573941 143 ntBASIC-1.76□□□□□ -2.69
RNF13O43567 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.77□□□□□ -2.69
RNF13O43567 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.77□□□□□ -2.69
RNF13O43567 RNU6-132P-201ENST00000383863 107 ntBASIC-1.77□□□□□ -2.69
RNF13O43567 MIR568-201ENST00000385036 95 ntBASIC-1.77□□□□□ -2.69
RNF13O43567 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms