Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4432-201ENST00000581823 84 ntBASIC-0.84□□□□□ -2.54
CUX2O14529 MIR548O2-201ENST00000616090 70 ntBASIC-0.84□□□□□ -2.54
CUX2O14529 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.85□□□□□ -2.55
CUX2O14529 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 RNU6-781P-201ENST00000516377 101 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 MIR4536-1-201ENST00000583537 88 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 U7.2-201ENST00000607576 63 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 MIR9-2-201ENST00000384838 87 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.86□□□□□ -2.55
CUX2O14529 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.87□□□□□ -2.55
CUX2O14529 U3.27-201ENST00000391237 200 ntBASIC-0.87□□□□□ -2.55
CUX2O14529 AL445193.1-201ENST00000441183 141 ntBASIC-0.87□□□□□ -2.55
CUX2O14529 MIR4436A-201ENST00000585278 85 ntBASIC-0.87□□□□□ -2.55
CUX2O14529 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.88□□□□□ -2.55
CUX2O14529 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.88□□□□□ -2.55
CUX2O14529 MIR3144-201ENST00000579460 79 ntBASIC-0.88□□□□□ -2.55
CUX2O14529 RNU6-86P-201ENST00000606534 107 ntBASIC-0.88□□□□□ -2.55
CUX2O14529 MTND5P18-201ENST00000445624 1801 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNU6-235P-201ENST00000362644 107 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNU6-10P-201ENST00000384036 107 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNU6-935P-201ENST00000410371 100 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNU6-65P-201ENST00000516332 98 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNU6-182P-201ENST00000516970 105 ntBASIC-0.89□□□□□ -2.55
CUX2O14529 RNY1P7-201ENST00000384743 110 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 AL353813.1-201ENST00000440700 253 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 RNU6-719P-201ENST00000516671 104 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 MIR4280-201ENST00000582178 76 ntBASIC-0.9□□□□□ -2.55
CUX2O14529 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.91□□□□□ -2.55
CUX2O14529 RNU6-804P-201ENST00000384286 107 ntBASIC-0.91□□□□□ -2.55
CUX2O14529 MT-TG-201ENST00000387429 68 ntBASIC-0.91□□□□□ -2.55
CUX2O14529 SNORD115-25-201ENST00000362619 82 ntBASIC-0.92□□□□□ -2.56
CUX2O14529 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.92□□□□□ -2.56
CUX2O14529 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.92□□□□□ -2.56
CUX2O14529 RNU6-762P-201ENST00000517107 102 ntBASIC-0.92□□□□□ -2.56
CUX2O14529 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.92□□□□□ -2.56
CUX2O14529 SNORD114-14-201ENST00000362723 75 ntBASIC-0.93□□□□□ -2.56
CUX2O14529 SNORA3B-201ENST00000391305 131 ntBASIC-0.93□□□□□ -2.56
CUX2O14529 MIR451A-201ENST00000385059 72 ntBASIC-0.94□□□□□ -2.56
CUX2O14529 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.94□□□□□ -2.56
CUX2O14529 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
CUX2O14529 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.95□□□□□ -2.56
CUX2O14529 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.95□□□□□ -2.56
CUX2O14529 AC021146.6-201ENST00000514659 117 ntBASIC-0.95□□□□□ -2.56
CUX2O14529 RNA5SP272-201ENST00000516095 111 ntBASIC-0.95□□□□□ -2.56
CUX2O14529 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.95□□□□□ -2.56
CUX2O14529 SNORD58C-201ENST00000365223 64 ntBASIC-0.96□□□□□ -2.56
CUX2O14529 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.96□□□□□ -2.56
CUX2O14529 MIR577-201ENST00000385196 96 ntBASIC-0.96□□□□□ -2.56
CUX2O14529 SNORA40.17-201ENST00000517256 115 ntBASIC-0.96□□□□□ -2.56
CUX2O14529 MIR4719-201ENST00000585233 84 ntBASIC-0.96□□□□□ -2.56
CUX2O14529 MIR569-201ENST00000385228 96 ntBASIC-0.97□□□□□ -2.56
CUX2O14529 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
CUX2O14529 RNU7-55P-201ENST00000459426 62 ntBASIC-0.97□□□□□ -2.56
CUX2O14529 AL353621.2-201ENST00000605340 133 ntBASIC-0.97□□□□□ -2.56
CUX2O14529 RNU6-54P-201ENST00000365563 107 ntBASIC-0.98□□□□□ -2.57
CUX2O14529 SNORD56B-201ENST00000384713 71 ntBASIC-0.98□□□□□ -2.57
CUX2O14529 SNORD38.3-201ENST00000516599 73 ntBASIC-0.98□□□□□ -2.57
CUX2O14529 RNA5SP169-201ENST00000517268 117 ntBASIC-0.98□□□□□ -2.57
CUX2O14529 AC025521.1-201ENST00000621624 286 ntBASIC-0.98□□□□□ -2.57
CUX2O14529 RNU6-832P-201ENST00000363319 107 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 SNORD50.2-201ENST00000365465 70 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 snoU13.13-201ENST00000458842 104 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 RNU6-75P-201ENST00000515944 104 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.99□□□□□ -2.57
CUX2O14529 FGF7P7-201ENST00000514120 227 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 MIR4694-201ENST00000578534 80 ntBASIC-0.99□□□□□ -2.57
CUX2O14529 MIRLET7F1-201ENST00000362202 87 ntBASIC-1□□□□□ -2.57
CUX2O14529 MIR518B-201ENST00000385127 83 ntBASIC-1□□□□□ -2.57
CUX2O14529 SCARNA20.2-201ENST00000516052 116 ntBASIC-1□□□□□ -2.57
CUX2O14529 MIR4679-2-201ENST00000578358 77 ntBASIC-1□□□□□ -2.57
CUX2O14529 MIR6851-201ENST00000617060 67 ntBASIC-1.01□□□□□ -2.57
CUX2O14529 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 SNORA13-201ENST00000458790 133 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 AC068339.1-201ENST00000526965 141 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 AL513043.2-201ENST00000573941 143 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 MIR4441-201ENST00000582623 100 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 MIR4439-201ENST00000583746 80 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 snoR1.1-201ENST00000628177 80 ntBASIC-1.02□□□□□ -2.57
CUX2O14529 SNORA49-201ENST00000386157 136 ntBASIC-1.03□□□□□ -2.57
CUX2O14529 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.03□□□□□ -2.57
CUX2O14529 RNU6-426P-201ENST00000516464 97 ntBASIC-1.03□□□□□ -2.57
CUX2O14529 MIR4324-201ENST00000584846 72 ntBASIC-1.03□□□□□ -2.57
CUX2O14529 AL157777.2-201ENST00000258070 137 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 RNY3P2-201ENST00000362918 102 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 SNORA40-201ENST00000388090 126 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 SNORD42B-201ENST00000458893 67 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.04□□□□□ -2.58
CUX2O14529 AC145423.2-201ENST00000610631 239 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms