Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 MIR9-2-201ENST00000384838 87 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 MIR451A-201ENST00000385059 72 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 RNU7-107P-201ENST00000459121 61 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 MIR4679-2-201ENST00000578358 77 ntBASIC-0.54□□□□□ -2.5
NPIPA2E9PIF3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
NPIPA2E9PIF3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.55□□□□□ -2.5
NPIPA2E9PIF3 AP000676.1-201ENST00000533307 52 ntBASIC-0.55□□□□□ -2.5
NPIPA2E9PIF3 AC108676.2-201ENST00000605225 163 ntBASIC-0.55□□□□□ -2.5
NPIPA2E9PIF3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.55□□□□□ -2.5
NPIPA2E9PIF3 RNU6-832P-201ENST00000363319 107 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 U3.27-201ENST00000391237 200 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 SNORD2-201ENST00000459163 69 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 RNU6-75P-201ENST00000515944 104 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 RNU6-971P-201ENST00000516920 106 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 RNU6-762P-201ENST00000517107 102 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
NPIPA2E9PIF3 RNY3P2-201ENST00000362918 102 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 RNU6-65P-201ENST00000516332 98 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 RNU6-255P-201ENST00000516957 105 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 AC068339.1-201ENST00000526965 141 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 MIR3613-201ENST00000579844 87 ntBASIC-0.57□□□□□ -2.5
NPIPA2E9PIF3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 RNU6-54P-201ENST00000365563 107 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 MIR548A1-201ENST00000385041 97 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 SNORA49-201ENST00000386157 136 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 AC114755.3-201ENST00000481111 251 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 RNU6-719P-201ENST00000516671 104 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 MIR3681-201ENST00000580089 72 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 MIR4536-1-201ENST00000583537 88 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 MIR4439-201ENST00000583746 80 ntBASIC-0.58□□□□□ -2.5
NPIPA2E9PIF3 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.59□□□□□ -2.5
NPIPA2E9PIF3 SNORD114-4-201ENST00000363962 75 ntBASIC-0.59□□□□□ -2.5
NPIPA2E9PIF3 SNORD50.2-201ENST00000365465 70 ntBASIC-0.59□□□□□ -2.5
NPIPA2E9PIF3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.59□□□□□ -2.5
NPIPA2E9PIF3 RNY4P3-201ENST00000365254 95 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 AL513043.2-201ENST00000573941 143 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 AL391099.1-201ENST00000624635 187 ntBASIC-0.6□□□□□ -2.51
NPIPA2E9PIF3 SNORD45B-201ENST00000364617 72 ntBASIC-0.61□□□□□ -2.51
NPIPA2E9PIF3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.61□□□□□ -2.51
NPIPA2E9PIF3 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.61□□□□□ -2.51
NPIPA2E9PIF3 AC145423.2-201ENST00000610631 239 ntBASIC-0.61□□□□□ -2.51
NPIPA2E9PIF3 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 SNORD56B-201ENST00000384713 71 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 RNU6-907P-201ENST00000390924 102 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 MIR548E-201ENST00000408287 88 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 AL445193.1-201ENST00000441183 141 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 RNU7-85P-201ENST00000458851 63 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
NPIPA2E9PIF3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 RNY1P5-201ENST00000383890 115 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 SNORD33.1-201ENST00000516213 88 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 MIR5009-201ENST00000578736 100 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 MIR3914-2-201ENST00000637339 95 ntBASIC-0.63□□□□□ -2.51
NPIPA2E9PIF3 MIR582-201ENST00000365731 98 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 MIR548U-201ENST00000390728 81 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 snoU13.13-201ENST00000458842 104 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 RNU6-794P-201ENST00000517261 64 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 AC103810.7-201ENST00000607821 91 ntBASIC-0.64□□□□□ -2.51
NPIPA2E9PIF3 RNU6-80P-201ENST00000384195 107 ntBASIC-0.65□□□□□ -2.51
NPIPA2E9PIF3 MIR548A3-201ENST00000385297 97 ntBASIC-0.65□□□□□ -2.51
NPIPA2E9PIF3 RNU6-644P-201ENST00000391155 98 ntBASIC-0.65□□□□□ -2.51
NPIPA2E9PIF3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.65□□□□□ -2.51
NPIPA2E9PIF3 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.65□□□□□ -2.51
NPIPA2E9PIF3 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 RNU6-813P-201ENST00000384691 107 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 SNORD42B-201ENST00000458893 67 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 snoU13.19-201ENST00000459148 104 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 U6.95-201ENST00000636931 70 ntBASIC-0.66□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 RNU6-132P-201ENST00000383863 107 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
NPIPA2E9PIF3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms