Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SHISA3A0PJX4 RNU6-321P-201ENST00000410912 106 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 AC093423.1-201ENST00000440817 142 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 RNU6-687P-201ENST00000516443 89 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 MIR4421-201ENST00000578133 69 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 MIR3675-201ENST00000583661 73 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.08□□□□□ -2.24
SHISA3A0PJX4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 RNU6-382P-201ENST00000365181 106 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 TRMT112P2-201ENST00000512910 132 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 MIR4773-1-201ENST00000637203 78 ntBASIC1.07□□□□□ -2.24
SHISA3A0PJX4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
SHISA3A0PJX4 RNU6-495P-201ENST00000362995 107 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 RNU6-330P-201ENST00000363015 107 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 SNORA8.2-201ENST00000384372 139 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 RNU6-634P-201ENST00000459134 106 ntBASIC1.06□□□□□ -2.24
SHISA3A0PJX4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SHISA3A0PJX4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.05□□□□□ -2.24
SHISA3A0PJX4 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
SHISA3A0PJX4 AC139453.2-201ENST00000487255 133 ntBASIC1.05□□□□□ -2.24
SHISA3A0PJX4 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
SHISA3A0PJX4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 MT-TY-201ENST00000387409 66 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 AC114801.3-201ENST00000510231 177 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 AL353770.2-201ENST00000620024 78 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 AL162376.1-201ENST00000624117 175 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 MIR664A-201ENST00000626086 82 ntBASIC1.04□□□□□ -2.24
SHISA3A0PJX4 RNU1-141P-201ENST00000364623 158 ntBASIC1.03□□□□□ -2.24
SHISA3A0PJX4 MIR154-201ENST00000385243 84 ntBASIC1.03□□□□□ -2.24
SHISA3A0PJX4 RNA5SP227-201ENST00000516184 113 ntBASIC1.03□□□□□ -2.24
SHISA3A0PJX4 MIR4460-201ENST00000577862 86 ntBASIC1.03□□□□□ -2.24
SHISA3A0PJX4 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.24
SHISA3A0PJX4 RNU6V-201ENST00000384105 107 ntBASIC1.02□□□□□ -2.25
SHISA3A0PJX4 RNU6-269P-201ENST00000391077 97 ntBASIC1.02□□□□□ -2.25
SHISA3A0PJX4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.02□□□□□ -2.25
SHISA3A0PJX4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
SHISA3A0PJX4 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
SHISA3A0PJX4 RNA5SP94-201ENST00000516917 108 ntBASIC1.02□□□□□ -2.25
SHISA3A0PJX4 MIR8053-201ENST00000613344 75 ntBASIC1.02□□□□□ -2.25
SHISA3A0PJX4 AL691482.2-201ENST00000457453 84 ntBASIC1.01□□□□□ -2.25
SHISA3A0PJX4 AC073869.9-201ENST00000641610 120 ntBASIC1.01□□□□□ -2.25
SHISA3A0PJX4 SNORA36.1-201ENST00000363424 132 ntBASIC1□□□□□ -2.25
SHISA3A0PJX4 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
SHISA3A0PJX4 RNU6-54P-201ENST00000365563 107 ntBASIC1□□□□□ -2.25
SHISA3A0PJX4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1□□□□□ -2.25
SHISA3A0PJX4 RNU6-539P-201ENST00000516665 103 ntBASIC1□□□□□ -2.25
SHISA3A0PJX4 RNU6-1039P-201ENST00000383931 107 ntBASIC0.99□□□□□ -2.25
SHISA3A0PJX4 RNA5SP222-201ENST00000411039 105 ntBASIC0.99□□□□□ -2.25
SHISA3A0PJX4 AC069503.3-201ENST00000618674 145 ntBASIC0.99□□□□□ -2.25
SHISA3A0PJX4 RNA5SP247-201ENST00000411181 105 ntBASIC0.98□□□□□ -2.25
SHISA3A0PJX4 NAMPTP3-201ENST00000569273 224 ntBASIC0.97□□□□□ -2.25
SHISA3A0PJX4 SNORD45.1-201ENST00000363181 77 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 SNORD114-4-201ENST00000363962 75 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 RNU6-590P-201ENST00000365039 107 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 RNU6-788P-201ENST00000390967 104 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 RNA5SP484-201ENST00000458857 111 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 MIR6509-201ENST00000614603 85 ntBASIC0.96□□□□□ -2.26
SHISA3A0PJX4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
SHISA3A0PJX4 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
SHISA3A0PJX4 MIR7107-201ENST00000611489 80 ntBASIC0.95□□□□□ -2.26
SHISA3A0PJX4 MIR8070-201ENST00000616510 88 ntBASIC0.95□□□□□ -2.26
SHISA3A0PJX4 SNORD42B-201ENST00000458893 67 ntBASIC0.94□□□□□ -2.26
SHISA3A0PJX4 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
SHISA3A0PJX4 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SHISA3A0PJX4 SNORD115-22-201ENST00000364456 82 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 SNORD115-31-201ENST00000365318 82 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 RNU6-649P-201ENST00000384463 107 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 RNU6-540P-201ENST00000384622 101 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 MIR7-2-201ENST00000384970 110 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 MIR140-201ENST00000385282 100 ntBASIC0.93□□□□□ -2.26
SHISA3A0PJX4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
SHISA3A0PJX4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.92□□□□□ -2.26
SHISA3A0PJX4 MIR499A-201ENST00000384903 122 ntBASIC0.92□□□□□ -2.26
SHISA3A0PJX4 RNU6-604P-201ENST00000390917 100 ntBASIC0.92□□□□□ -2.26
SHISA3A0PJX4 SNORD30.1-201ENST00000391309 70 ntBASIC0.92□□□□□ -2.26
SHISA3A0PJX4 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
SHISA3A0PJX4 SNORA36.2-201ENST00000384004 127 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 RNU6-895P-201ENST00000384125 103 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 RNU6-663P-201ENST00000391105 106 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 AC006210.1-201ENST00000424882 111 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 RNU6-881P-201ENST00000516813 102 ntBASIC0.91□□□□□ -2.26
SHISA3A0PJX4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SHISA3A0PJX4 RNU6-260P-201ENST00000384092 107 ntBASIC0.9□□□□□ -2.27
SHISA3A0PJX4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SHISA3A0PJX4 SNORA2.1-201ENST00000363089 137 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 RNA5SP517-201ENST00000364724 117 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 SNORD45A-201ENST00000384512 84 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 SNORD110-201ENST00000408189 75 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 MIR3657-201ENST00000584818 117 ntBASIC0.89□□□□□ -2.27
SHISA3A0PJX4 AC092634.7-201ENST00000621022 103 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms